BO20666.complete Sequence
1030 bp assembled on 2009-05-13
GenBank Submission: KX799585
> BO20666.complete
GAAGTTATCAGTCGACATGAGTTCCAAAAAGAATATAACTCCACCAAACA
ATTCAGCCGATAAGGAAACGGATCGCAAAATCCCCGAAGAGTCTCTATCA
ATCACTAACCATCCGGGGGCCACATCAACGCCAACTTATATGACACGCAA
ACGGCAGAGGCTTTTATCTCTCCAGATGGATTCTGCATTGTCATTGTCAT
TGGTGGATCGAGTTCCACAAACATTCGAGGATATTCGTGGACGAAAGGGT
ATTCGTGATGCCAGTTCTCCAAAAACTGGTAAACTCCCAAGGACTAAAGC
CCGGAATATACCGAAAACACCAGCGCGTGTTTCCCCAAGTATAAATCATG
GTAGGAATTCTGCTAAGCCAAAGACCCCAGCTAAAAAGAAGACTACGGAG
AAAACTCCTGCGAAGACGCCCACAGACACGCCGAAAATATCGCCAAAAAA
TACGCGACAAATATCGCCGAACAAGTCGCCAAAAACTTTCTCGATGATGC
AAAATGTTCCAGCAAAAAAATCACCAATAAAATCATTAATAAAGAAGCCG
AAAACGCCAGCAGTGAAATCACCAATTGAACCCATTATATTACCAACAGA
GTCCCAATTGAAATCTCCGATAAAGTTATCAATTTCGCCAACGAAATCAT
CAATGATGTCAACGATTTTGACAAAGCAGTCGGTGAAGTCCGAAAAGAAT
TCCCCTGAAGCCCATTTCTCTGGAGAAGTAACCAATAAGGAAAATGCCGC
TGAAGAAGATATTTCGGAGCCACCTTCAAAACAGCCTCGTCTACATATTT
TGCAAGTCAATTTGGGGTCCCCATTCGCAATGACGCACAGCAAAAAACTG
AAAGTAATTGCAGTAGATTCCAATGATGAAAATCAGGAAGCAAAAGAAGC
ACCTCCTGACAATTTAAGCGAAATCAACACAAGTGAGGAAATGAAGTCCT
TCGAAATCAAAAATTCTTTTAAAAATGAGATAGAAAAATCGGACAAAAAT
TGTTTTATTTCGGCAAGCTTTCTAGACCAT
BO20666.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:47:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18518-RA | 999 | CG18518-PA | 1..996 | 17..1012 | 4980 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:47:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18518-RA | 1090 | CG18518-RA | 51..1046 | 17..1012 | 4980 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:47:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 15834613..15835608 | 1012..17 | 4980 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 13:47:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tabor | 7345 | Tabor TABOR 7345bp | 6631..6752 | 434..554 | 112 | 55.7 | Plus |
BO20666.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:37:55 Download gff for
BO20666.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18518-RA | 1..996 | 17..1014 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:33:05 Download gff for
BO20666.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18518-RA | 51..1046 | 17..1014 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:26:32 Download gff for
BO20666.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18518-RA | 51..1046 | 17..1014 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:26:32 Download gff for
BO20666.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 15834611..15835608 | 17..1014 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:33:05 Download gff for
BO20666.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 15834611..15835608 | 17..1014 | 99 | | Minus |
BO20666.pep Sequence
Translation from 16 to 1030
> BO20666.pep
MSSKKNITPPNNSADKETDRKIPEESLSITNHPGATSTPTYMTRKRQRLL
SLQMDSALSLSLVDRVPQTFEDIRGRKGIRDASSPKTGKLPRTKARNIPK
TPARVSPSINHGRNSAKPKTPAKKKTTEKTPAKTPTDTPKISPKNTRQIS
PNKSPKTFSMMQNVPAKKSPIKSLIKKPKTPAVKSPIEPIILPTESQLKS
PIKLSISPTKSSMMSTILTKQSVKSEKNSPEAHFSGEVTNKENAAEEDIS
EPPSKQPRLHILQVNLGSPFAMTHSKKLKVIAVDSNDENQEAKEAPPDNL
SEINTSEEMKSFEIKNSFKNEIEKSDKNCFISASFLDH
BO20666.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:55:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18518-PA | 332 | CG18518-PA | 1..332 | 1..332 | 1684 | 100 | Plus |