BO20667.complete Sequence
1039 bp assembled on 2009-05-13
GenBank Submission: KX798821
> BO20667.complete
GAAGTTATCAGTCGACATGGCGGAGGAGCTAAAAGTGTTCTTCGAAGAGT
GTCGTGGACAAGGGTTTTCCGCAAAGGAAATGCTGGCTGTATGTCAACCT
TTGATTTGGAGAATCCGCTTGGCTCGAATCAAGAAATGGTTCTTCATCCT
ACTGCCCCTGATGGTTATTTATCTGCTTTGGCTATGCAGTGACACCTTTT
CTTGGTGGCTAAGTGCCCTGGGTCGATTGGTGCTCATACAGATCCTTCCA
CTCTGGGATTGGCGGCCCTACTATCATGCCAAGTGCCTGATACCACGCGA
TCAAAGTGTCCAAGAGCAGGCACCATCATTGGGTAAAGCGGAGACCTTGC
GGCAGAATTGCGATCTCTGTGAAGGTTTGGAGGGAATAGGCACGGTTTCC
AATGTAAGCTACTCCTCCTTGGAGTCTGAGCACCTAGAACGTGGGCAACC
AGTGATTATAACAGACACTGGACTGCAAACGGATGTTTTTAGTCTCCTAG
AGCAAATAGAGAAGAAGTCACCTCAGTGGCTAACCAGTGAACCTTGTGAT
GTTTCCAGCAATCTGTTGCTGAGGAAACTTTTTAACCTAGAGGCGGCTCT
GGATAAGATTCATTCCTGGCAGGGACAGACATCGAATTCTTGGCACCTTC
AACTGAGGAACTGCCAGAAGAAGGCGGTGAAGTCCTCTCGGCTTTTTCTG
GATCGTCCCTACTACTACCCACTTCACCTGGCCCCGTATTACTCCAGCTG
GCTATTGGCAGTCCATCAGCAAAAGCGAAACCAAGCCGATATATACGTGC
GTGGCCTAGTGCTCATCCAGCAACTGAGTGGCCACTTTGAGATGGTTCTC
CATCCAAAGAAGCCCTGCAATAAAGGAATATGTCCAAGCTTGCGGATGCG
ACTGAATGCAGGAGAAGGTCTGATCTTTACCACGGATATCTGGAGCCTAA
GTTATGGTCTGGAGAAACCCCACGGAAAGCTGACCTCCCTGGCTAGCATT
TTCGAGATAGACTGGCAGCCGGCAAGCTTTCTAGACCAT
BO20667.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:52:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30053-RA | 1008 | CG30053-PA | 1..1005 | 17..1021 | 5010 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:52:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30053-RA | 1088 | CG30053-RA | 17..1023 | 15..1021 | 5020 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:52:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12688798..12689439 | 1021..380 | 3210 | 100 | Minus |
2R | 25286936 | 2R | 12689495..12689860 | 380..15 | 1815 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:52:14 has no hits.
BO20667.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:37:55 Download gff for
BO20667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30053-RA | 1..1005 | 17..1023 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:14:59 Download gff for
BO20667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30053-RA | 19..1023 | 17..1023 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:29:59 Download gff for
BO20667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30053-RA | 19..1023 | 17..1023 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:29:59 Download gff for
BO20667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12688796..12689438 | 381..1023 | 99 | <- | Minus |
2R | 12689495..12689858 | 17..380 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:14:59 Download gff for
BO20667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8576301..8576943 | 381..1023 | 99 | <- | Minus |
arm_2R | 8577000..8577363 | 17..380 | 99 | | Minus |
BO20667.pep Sequence
Translation from 16 to 1039
> BO20667.pep
MAEELKVFFEECRGQGFSAKEMLAVCQPLIWRIRLARIKKWFFILLPLMV
IYLLWLCSDTFSWWLSALGRLVLIQILPLWDWRPYYHAKCLIPRDQSVQE
QAPSLGKAETLRQNCDLCEGLEGIGTVSNVSYSSLESEHLERGQPVIITD
TGLQTDVFSLLEQIEKKSPQWLTSEPCDVSSNLLLRKLFNLEAALDKIHS
WQGQTSNSWHLQLRNCQKKAVKSSRLFLDRPYYYPLHLAPYYSSWLLAVH
QQKRNQADIYVRGLVLIQQLSGHFEMVLHPKKPCNKGICPSLRMRLNAGE
GLIFTTDIWSLSYGLEKPHGKLTSLASIFEIDWQPASFLDH
BO20667.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:55:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30053-PA | 335 | CG30053-PA | 1..335 | 1..335 | 1794 | 100 | Plus |