Clone BO20672 Report

Search the DGRC for BO20672

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:206
Well:72
Vector:pDNR-Dual
Associated Gene/TranscriptCG15337-RA
Protein status:BO20672.pep: Imported from assembly
Sequenced Size:1249

Clone Sequence Records

BO20672.complete Sequence

1249 bp assembled on 2009-05-13

GenBank Submission: KX797546

> BO20672.complete
GAAGTTATCAGTCGACATGGACACAACAATGCCGATGGGCATGGTGCCCA
ACAGTCTCAATCCGATCCTCAATCCTCGACCCCTGCCGATACCCGTTACC
AAGCCCAGAACCAAACTCCAGCCGGATGAGCCACACGATGGCGTTTTAGC
GTTTAACAAGGGAAAAGTACCTCCGCCGGTATCCTCACGTCCTATTCCGC
TCCAGCGTGCAATGTCTGAGGTTCGGGACGCGCTGCGAGCTCAGCCTCAG
GCCAGTGACATTCGCCTGTTGATCTTCACGGCGGCGGCCAGCAGTGTGGA
GCACGAGAGAACTCTCATTCCGGTGCCGCCACAATTTCAAGCGGCACCAG
GCTCCGGCTGCCAAGTGGATCGATTGCGTCACGCCGTCGCCGATAATTGG
CCCTCCTGTCGCATCATGTTGGACTGCCCCAGTACTGACGAGCAGTATGC
CGCTTTGATGCCGGACGATGTGGACGCCCTGCATTTGCTGCACTGGATCC
TGGTGGCCACGCCCTCGTCGCCCACTCTGCGCCGCATGTCGGGATTGCAT
TTGCGGCGACTTTGCCGCTTTCTGGGCCTGGCACGACCCACCTTGGAGCC
CGGCCATCTGCTGAGCATCAGTTATGAGCGGAATGTTCAGCGGCTGGGCG
ATTCGAGTCCAAGGCCAAGATCCAGTTACGCCTATCTGGGCTTGCCCTTT
CAGTACCTATATCGTTTCCTGGCCACTGGACGTCTGGAGCAACCGCCAGG
TGTTGCCATTCGTTTGTATGCCCAACCGGAAACAGCCTTGGTTCACTGCG
ACGAGCTGAGCTCGCTGCCGCAGCAGCAGCATGTCCAGTCGGAGGAGCAA
TCGTCCAGCCAATCCATTGCAGAGAGGGAGCAGTCTGGAAATTCAAGCTC
GCTGTGCTGGCGGAACTCCACGCTCACTGCACCGCAAAGGGCACTGGTCA
TATGCGAACTACCCTCGGAGTTGGACGAATCCATTGCCCATTCGCCGGAG
AAGCATTTTCTCGAGTACTTTGTGCAGGAATCGCTGTCACTGCGACCCTG
CTATCTGCTCCTCTTCGACGAGGCGGTGGCCTCCAACATAATGTTCGTCT
GGCCGGGCAAATGTATTGAGCTGGAGCATCCGGGTCCTTCGATGGTCCAG
AGATCGCGTATCAGGATCATGAATATCGTCCGGAATCTGAGCAACCGGTT
GGGAGCAGTTAGGCGGGCTTTAGCCGCCATTGCAAGCTTTCTAGACCAT

BO20672.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:54:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG15337-RA 1218 CG15337-PA 1..1215 17..1231 6075 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:54:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG15337-RA 1430 CG15337-RA 57..1274 14..1231 6090 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:54:31
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8160322..8161396 157..1231 5375 100 Plus
X 23542271 X 8160110..8160252 14..156 715 100 Plus
Blast to na_te.dros performed on 2014-11-27 07:54:32 has no hits.

BO20672.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:37:59 Download gff for BO20672.complete
Subject Subject Range Query Range Percent Splice Strand
CG15337-RA 1..1215 17..1233 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:54:05 Download gff for BO20672.complete
Subject Subject Range Query Range Percent Splice Strand
CG15337-RA 60..1274 17..1233 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:07:04 Download gff for BO20672.complete
Subject Subject Range Query Range Percent Splice Strand
CG15337-RA 60..1274 17..1233 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:07:04 Download gff for BO20672.complete
Subject Subject Range Query Range Percent Splice Strand
X 8160113..8160252 17..156 100 -> Plus
X 8160322..8161396 157..1233 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:54:05 Download gff for BO20672.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 8054146..8054285 17..156 100 -> Plus
arm_X 8054355..8055429 157..1233 99   Plus

BO20672.pep Sequence

Translation from 16 to 1249

> BO20672.pep
MDTTMPMGMVPNSLNPILNPRPLPIPVTKPRTKLQPDEPHDGVLAFNKGK
VPPPVSSRPIPLQRAMSEVRDALRAQPQASDIRLLIFTAAASSVEHERTL
IPVPPQFQAAPGSGCQVDRLRHAVADNWPSCRIMLDCPSTDEQYAALMPD
DVDALHLLHWILVATPSSPTLRRMSGLHLRRLCRFLGLARPTLEPGHLLS
ISYERNVQRLGDSSPRPRSSYAYLGLPFQYLYRFLATGRLEQPPGVAIRL
YAQPETALVHCDELSSLPQQQHVQSEEQSSSQSIAEREQSGNSSSLCWRN
STLTAPQRALVICELPSELDESIAHSPEKHFLEYFVQESLSLRPCYLLLF
DEAVASNIMFVWPGKCIELEHPGPSMVQRSRIRIMNIVRNLSNRLGAVRR
ALAAIASFLDH

BO20672.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:55:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG15337-PA 405 CG15337-PA 1..405 1..405 2110 100 Plus