BO20676.complete Sequence
1192 bp assembled on 2009-05-13
GenBank Submission: KX797773
> BO20676.complete
GAAGTTATCAGTCGACATGAAGAAGAAGAGTCGTAGAGATCGGACACCAA
AAGTAGAACAACCTGAACCATCGAGAGTTGTCAACACGGAGCCTATTCGA
CTGAACGTGGAACCCCAATCCCAAGAGATAGATGACCAGGCTGCACCATT
TATTTTGGTAGACTGTGCGAAATATGAGGATCGTTCAGATTTGGAAGCAA
TGCTTAGTTCCATAGAAAAGGAACGGATGAAAAAGGTTCAGGCAGATATA
GAGCAGCAATATTTTCCCCTCCTGGAGGATGAAGAACCACCTCCAGAATT
AGATATGCCTATAAACCTAAGCTCTCAAGCATTGGCTGTACTGAATGATG
CAGATAATGAGCGCCGCTTTAAAGAGGATCTGGAGAGCCTTAGTATTGCT
GGACTGGAAGAGAAAGATACATCCATTAGCATTACCAACATGAAAATAGA
AGACAGCAAACTATTGTTTCGGACTATGCCAGGTATGAATCAGATTTGCT
GCACGCTAGAGCAGATGAAAAATGTTCATGGGAAAATTGGACCAGCAGAA
CCAACTCCACAGGCACGTTGCACCAGCTTGATTCCACTTTCAGGCCTTCG
CCGGCAAGACACCTTCGAAATTAAACGTAAAAAGAACCAAAAGATTAGAT
ATCCCGAGGTTTCCACCAAATCAGCAATTAGCGAAAGGAAACATCTACCA
TTAATTGCCAAGGGAGGAAAATGTGAGAAAGTTATCTCAGAGACTGATAA
GATTTTCAGCCAGATTGGCGATCTTCTCGTGAAACTGCAGCTCCAACACG
AGGGCAGCAAAGTCCTGAACAAGGGATCCTCTTATTCCTACATGGTGAAC
ATTAAGCCAGCTGGAGGTGCATCCAATTGTTCAGTTTATGCGCTTACAAA
ACTCAAATCGCACGAAGTAGAGGAGACGCATGCCGAAAATCTAAGAACTT
CTCACGCTCCATTGATCAACATTTTATACCCTGGTCGTGGTGGACTTATG
GAGACTTCTGAGTTGTCCACGACCGCACGATGTATCGATGGAAGCTCCAT
TGGGTCGATGTCCCTTCGCGAAACGCCGTCCTCCAAGATCAAACCATCAT
TTTTACGCAAAAGGCCCAGTTCCCATCTAAGGGCACCTAACCCTGTCAAA
TTTTGCCACGGCAGGAAGAAAAATGCAAGCTTTCTAGACCAT
BO20676.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:52:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10164-RB | 1161 | CG10164-PB | 1..1158 | 17..1174 | 5790 | 100 | Plus |
| CG10164-RA | 1161 | CG10164-PA | 1..1158 | 17..1174 | 5790 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:52:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10164-RB | 2401 | CG10164-RB | 709..1874 | 9..1174 | 5800 | 99.8 | Plus |
| CG10164-RA | 1933 | CG10164-RA | 539..1704 | 9..1174 | 5800 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:52:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23554850..23556016 | 1174..8 | 5805 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:52:11 has no hits.
BO20676.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:37:52 Download gff for
BO20676.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10164-RA | 549..1706 | 17..1176 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:55:37 Download gff for
BO20676.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10164-RA | 547..1704 | 17..1176 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:29:03 Download gff for
BO20676.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10164-RA | 547..1704 | 17..1176 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:29:03 Download gff for
BO20676.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23554848..23556007 | 17..1176 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:55:37 Download gff for
BO20676.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19380570..19381729 | 17..1176 | 99 | | Minus |
BO20676.pep Sequence
Translation from 16 to 1192
> BO20676.pep
MKKKSRRDRTPKVEQPEPSRVVNTEPIRLNVEPQSQEIDDQAAPFILVDC
AKYEDRSDLEAMLSSIEKERMKKVQADIEQQYFPLLEDEEPPPELDMPIN
LSSQALAVLNDADNERRFKEDLESLSIAGLEEKDTSISITNMKIEDSKLL
FRTMPGMNQICCTLEQMKNVHGKIGPAEPTPQARCTSLIPLSGLRRQDTF
EIKRKKNQKIRYPEVSTKSAISERKHLPLIAKGGKCEKVISETDKIFSQI
GDLLVKLQLQHEGSKVLNKGSSYSYMVNIKPAGGASNCSVYALTKLKSHE
VEETHAENLRTSHAPLINILYPGRGGLMETSELSTTARCIDGSSIGSMSL
RETPSSKIKPSFLRKRPSSHLRAPNPVKFCHGRKKNASFLDH
BO20676.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:55:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10164-PB | 386 | CG10164-PB | 1..386 | 1..386 | 1975 | 100 | Plus |
| CG10164-PA | 386 | CG10164-PA | 1..386 | 1..386 | 1975 | 100 | Plus |
