Clone BO20679 Report

Search the DGRC for BO20679

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:206
Well:79
Vector:pDNR-Dual
Associated Gene/TranscriptCG14535-RA
Protein status:BO20679.pep: Imported from assembly
Sequenced Size:3427

Clone Sequence Records

BO20679.complete Sequence

3427 bp assembled on 2010-10-20

GenBank Submission: KX797696

> BO20679.complete
GAAGTTATCAGTCGACATGGCCACCACCAGTACGTCAAACATGTCCCGCA
ACGGTGGCTTCTGTGGTGCATTGCAGCGGGCACCGCCGCCGATGCCGCCG
ACCCTCATCCGACGCCTGAGTAGCCGGGAGTGCTACGGAGTGGGCAAGGT
GAAGGTCATGCTGCGGGTGGCGGACCGGGACAGGAACTCCGGCGGAACCG
AGCCGGACTTTATGGCCCTGGACAAGAAGAAGCGACAGGTCACGCTCACC
GATCCGAGAACCGCGTGTCCGCCGCCCCAGGCTGCCCAGGAACGGGCGCC
CATGGTGGCCGCTCCCAAAATGTTTGCATTCGATAACCTCTTCACTGGCG
AGGATAAGCAGTCGGATGTGTGTGCATCGGCGCTGAGCGAAGTGATACCC
GCCGTGCTCGAAGGTTCCGATGGCTGCCTGCTGGCCATGGGATATCCCGC
CACCGGCCAGGCCCAAACGGTGTTGGGAGAACTGGGCGGTGGTAGTGGGA
GTGGCAGTGCCAGTGGCAGCGGTGTGGCGTGTTCCCTGGGAGCAGCACCC
TGCGCCATCGCCTGGCTGTACAAGGGCATCCAGGAGAGGCGGCAGAAGAG
CGGAGCACGCTTCTCGGTGCGGGTCAGTGCCGTGGGCGTCAGTGCCACCA
AGCCGGATGCCCTATCGCAGGATTTGCTCATCTCGCATGCAGCCGAATCT
GACGACTCCCCGGGGATTTATTTGCGTGACGACTTCCTTGGCGGTCCAAC
GGAACTACGTGCACCCACCGCCGAGCGTGCGGCCCTTTTCCTCGACTCAG
CGCTCGCCGGACGCTTAAAAAGTTCCGGTTCCACGGCATCTGGGAGTTCT
GGATGTGCCGCCCCCTTGGAGTCCGCCCTCATCTTCACGCTGCACGTCTA
CCAGTACAGCCTGTCCCGCAAGGGAGGTGTTGCTGGCGGTCGGAGCCGTT
TACATATCATCGACCTGGGCGGGTGTGCGAATCGCAACGGGGGACTGCCG
CTGTCGGGGATCGGTAACATACTGCTCGCGATACTATCCGGCCAGAGGCA
TCCCCCACACAAGGACCACCCGCTGACGCCGCTGCTCAAGGACTGCCTGG
CCCCCATTACCTGCCATGTGGCCATCGTGGCCCATGTGCGACCAGAGCAG
AGCTATCAGGACGCACTCTCCACCATTCAAATCGCATCCAGAATTCATCG
GCTGCGTCGCAGGAAACATCGTGTTCCCATGCCCTTGGCTGTGGGCTTGG
CCCAAGGACTCGGCGGCAACGGCTCCTCGGCGGGATCGGGTGCGGATCCG
TCGAGCTCGGAAATCTCAGCCGACACTGTCATCTATATGGGGCCCAATGA
CGATGCCACGGATGGGGAACATCCGCCCGTATATCTGCCATCGCTGACTG
CGGGGGATAATCGCGGGGTGATGAGTAAAGCCCTCAAAGGGAGTGGGCTG
GAGAAGCCCCCCTCGAAGTCAGCTTCCAACAGTCCCATGATGATGAAAAA
AGCCATGGCAGCGGAAAAAGCTAAAAAGCTTCCGGGAAGCCACACGGGCA
GTCTGAAACGTCAGGCGGGAGCGGGAGCCTGCTCCTCGCCAATGATTCCA
CACGAGCAGCCACAGATACAGGCAATGGGTTCACCTATACCGATACCCCG
GCACATGGTGTCCAAAGGGTCGATGGTGCCCTCGCCGAAGGGATCGCCCA
TGCGAAGAGCTCATCCGGGAGCAGCTCTCGAACAGCTGGAAGCGGGAATG
AGGAAAATAACGGAAGAGCAGTGGATCGATGGACCACGAGTGTCCAGGGC
GAAGGTAGCGGAAGCTCGTCATCTAATGAGGGAGGTGAATCATGTGAAGC
AATGCGAAACATGGGTGGATGGTCCAAAGTCGCAATCGTGCAGATCCTTG
ACAGCCTGCAATCTTCCAGCAGCCGGCGGAAGTCAGACACAGGGCTATGG
TTTTATGGATGCCCACAAGAAGACCATGATTCGACAGTGGGTTGAGAATC
AGACAACGCAAGTCTTCCAAAGTACGGTGTCCGCCAGTAATTCCCCCACT
GCTTTGCACTGGAAACTCTCGCAGTTGAAGCAGAAATCACTGGATTTACC
AGACAGACCTGCATTCAATCCGGAACCCTCCTTGGATCTGAATCAGCCGT
GCTTCGAGAGTTTACCTCTTCTGGATCCAGCTCCTCCGGATGGCGACGAG
GACGAAGACAGCGGTCCGTCAGAGGTACCCCCTGCTCTACCATTACTGGA
TGATCCCCTCGGCTCCAGGGACATATCACAGGATAATCTACACAGGATGC
TCTCGCGGCATGTGTCCAGGGAACAGCTTCATGAGGCTGAACTGGTGGCC
AGTCGAGCGTCATCCTCGCATCATCCATCCCAACGGAGTATTGATTGTGG
CCTGCAAGTTACGGAGGAAGAGATCGCCAGGACCATGTCCAGAGATCGGG
ATCACGATCCCAGTGCACATCCTCTATCAGCTCTGAGTCACTGCGACAAC
ATATCCTTTGTGTCCAGCTTCAACATGGCCTGTGAATCTTTCAGCGAGTG
CGGCGAAAGAGCAAGACAACAATTTGATCAGCTGGCTCGCCTGCACGAGA
TCTTCACCTCCCAACTGGCCATGGCAGAGGTCACGCCCTCCGCCGCACTT
TTCCGGACGGATATTGGAAGTGTGTTTAGTGAGCCGGTTTATCACTTCAA
CGTGGGCCAGAGTAGCGTTTGCAGTGAACCAGCCTACAGATTGACACCCA
GTCCGCCAAAGCAACCGTCACACAGTCCAAGTCAAGGGTCACTCCCCAGT
TTGAATGGCATCATGGAGATAGCAGGAATGGATGATTATGCTCTACTCCG
CCAGCCAGACGGAGCATCCGATCCCAATCTGCAGAAAGGAGAGAAAAGAT
TCACGCCACAGCACGATGATATTTGCGAATTGGATGAGAAATCCATGGCG
GCGGCGGTGGGCAAGGGAAATTCTCTGGAGGATGCACAGCACAAGCTGAA
CGAGATCACGAACATCCTACCCCTGGCTGCTCAATCGCGACTTCCCCTGC
TGCCCCTGAATACCAGCTCCGAGGCCTATGATAGTGGTCATGACTCCAAC
TCCACTCCGAGGACTTCCAAACATTCGGGCATATCCCGTCGGGCGGAGAG
TGGTTATCACAGTGTGGCCACCGTTAGGGATTCGGATGAGAGTAGCTTCG
CGTCCGGCATGTCCAAGGGTCAACGGCATCGCATCACCGTTTCAGGAACA
GGAGCAGTCACATCGGCGGGCATTGGAAATTACCAGAGGCAGTGCCACAA
GAAGCGACATCGACAGGATCAGGCTGGCAACAACAAAGGCCTCTGCAACT
GGCTCTTGACACCATTTTCCTGCACTTATCCAGAGACTGAGGGTGAGATC
AGCGATTTTGCAAGCTTTCTAGACCAT

BO20679.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:27:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG14535-RB 3396 CG14535-PB 1..3393 17..3409 16965 100 Plus
CG14535-RA 3396 CG14535-PA 1..3393 17..3409 16965 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:27:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG14535-RB 5826 CG14535-RB 517..3910 16..3409 16970 100 Plus
CG14535-RA 5606 CG14535-RA 297..3690 16..3409 16970 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:27:28
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7847805..7848851 2565..1519 5235 100 Minus
2L 23513712 2L 7846821..7847666 3409..2564 4230 100 Minus
2L 23513712 2L 7848993..7849590 1526..929 2975 99.8 Minus
2L 23513712 2L 7852957..7853302 361..16 1730 100 Minus
2L 23513712 2L 7851407..7851743 695..359 1685 100 Minus
2L 23513712 2L 7850306..7850540 929..695 1175 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:27:29 has no hits.

BO20679.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-10-20 10:48:55 Download gff for BO20679.complete
Subject Subject Range Query Range Percent Splice Strand
CG14535-RA 1..3393 17..3411 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:32:03 Download gff for BO20679.complete
Subject Subject Range Query Range Percent Splice Strand
CG14535-RA 298..3690 17..3411 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:13:28 Download gff for BO20679.complete
Subject Subject Range Query Range Percent Splice Strand
CG14535-RA 298..3690 17..3411 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:13:28 Download gff for BO20679.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7846819..7847664 2566..3411 99 <- Minus
2L 7847805..7848849 1521..2565 100 <- Minus
2L 7848999..7849589 930..1520 100 <- Minus
2L 7850306..7850539 696..929 100 <- Minus
2L 7851407..7851740 362..695 100 <- Minus
2L 7852957..7853301 17..361 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:32:03 Download gff for BO20679.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7846819..7847664 2566..3411 99 <- Minus
arm_2L 7847805..7848849 1521..2565 100 <- Minus
arm_2L 7848999..7849589 930..1520 100 <- Minus
arm_2L 7850306..7850539 696..929 100 <- Minus
arm_2L 7851407..7851740 362..695 100 <- Minus
arm_2L 7852957..7853301 17..361 100   Minus

BO20679.pep Sequence

Translation from 16 to 3427

> BO20679.pep
MATTSTSNMSRNGGFCGALQRAPPPMPPTLIRRLSSRECYGVGKVKVMLR
VADRDRNSGGTEPDFMALDKKKRQVTLTDPRTACPPPQAAQERAPMVAAP
KMFAFDNLFTGEDKQSDVCASALSEVIPAVLEGSDGCLLAMGYPATGQAQ
TVLGELGGGSGSGSASGSGVACSLGAAPCAIAWLYKGIQERRQKSGARFS
VRVSAVGVSATKPDALSQDLLISHAAESDDSPGIYLRDDFLGGPTELRAP
TAERAALFLDSALAGRLKSSGSTASGSSGCAAPLESALIFTLHVYQYSLS
RKGGVAGGRSRLHIIDLGGCANRNGGLPLSGIGNILLAILSGQRHPPHKD
HPLTPLLKDCLAPITCHVAIVAHVRPEQSYQDALSTIQIASRIHRLRRRK
HRVPMPLAVGLAQGLGGNGSSAGSGADPSSSEISADTVIYMGPNDDATDG
EHPPVYLPSLTAGDNRGVMSKALKGSGLEKPPSKSASNSPMMMKKAMAAE
KAKKLPGSHTGSLKRQAGAGACSSPMIPHEQPQIQAMGSPIPIPRHMVSK
GSMVPSPKGSPMRRAHPGAALEQLEAGMRKITEEQWIDGPRVSRAKVAEA
RHLMREVNHVKQCETWVDGPKSQSCRSLTACNLPAAGGSQTQGYGFMDAH
KKTMIRQWVENQTTQVFQSTVSASNSPTALHWKLSQLKQKSLDLPDRPAF
NPEPSLDLNQPCFESLPLLDPAPPDGDEDEDSGPSEVPPALPLLDDPLGS
RDISQDNLHRMLSRHVSREQLHEAELVASRASSSHHPSQRSIDCGLQVTE
EEIARTMSRDRDHDPSAHPLSALSHCDNISFVSSFNMACESFSECGERAR
QQFDQLARLHEIFTSQLAMAEVTPSAALFRTDIGSVFSEPVYHFNVGQSS
VCSEPAYRLTPSPPKQPSHSPSQGSLPSLNGIMEIAGMDDYALLRQPDGA
SDPNLQKGEKRFTPQHDDICELDEKSMAAAVGKGNSLEDAQHKLNEITNI
LPLAAQSRLPLLPLNTSSEAYDSGHDSNSTPRTSKHSGISRRAESGYHSV
ATVRDSDESSFASGMSKGQRHRITVSGTGAVTSAGIGNYQRQCHKKRHRQ
DQAGNNKGLCNWLLTPFSCTYPETEGEISDFASFLDH

BO20679.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:43:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG14535-PB 1131 CG14535-PB 1..1131 1..1131 5894 100 Plus
CG14535-PA 1131 CG14535-PA 1..1131 1..1131 5894 100 Plus
Klp64D-PA 677 CG10642-PA 18..357 42..401 216 24.3 Plus