BO20683.complete Sequence
892 bp assembled on 2009-05-13
GenBank Submission: KX794642
> BO20683.complete
GAAGTTATCAGTCGACATGTTCAGTATCAGCGAGCTCTGTTGCATGTTTT
GCTGCCCCCCGTGTCCGGGTCCCATTGCGGCCAAGTTGGCCTTCCAGCCG
CCGGAGCCCACGTACAAATTGACCCCGGCGGACGACACCAACATCCGGTA
CAACCTGCAGTTGTTCGACCGCGCCGAGTGGCAGTACTCTGAACGTGAGA
AATCGAAAGTGGAGGCCTTCTTTACGCGCACCTCGCGTGGCAACCTGATC
ACCTGCATCTATGTCAGGTGCAGCAAGAATGCCAAGTACACACTTCTCTT
CTCCCACGGGAATGCAGTGGATTTGGGCCAAATGAGCAGCTTCTACCTGA
CCCTGGGCTCCCAGATCAACTGCAATATCTTTGGGTACGACTACTCCGGG
TACGGAATGAGTGGCGGCAAGCCGTCCGAGAAGAATCTGTATGCGGACAT
CGAGGCTGCCTGGCAGGCGATGAGAACCAGATTCAACATCAGCCCGGAGA
CAATCATCTTGTATGGCCAAAGCATTGGCACTGTGCCCACTGTGGACCTG
GCCTCGCGTCACGAGGTCGGCGCTGTGATACTCCATTCGCCGCTGATGTC
CGGCCTAAGGGTCGTCTTTAGGAACACAAAGAGAACCTGGTTCTTCGACG
CCTTTCCCAGCATTGATAAGGTGGCTAAGGTGAAGGCTCCGGTTCTGGTT
ATCCACGGCACCGATGATGAGGTCATTGACTTTTCCCATGGCATCGGAAT
CTACGAGCGGTGTCCTAAGACTGTCGAGCCGTTTTGGGTGGAGGGTGCTG
GACATAATGATGTGGAACTGCATCCGCATTATTACGAGCGACTGCGCAAA
TTTCTTTCGGTGGAACTCGTCAAAGCAAGCTTTCTAGACCAT
BO20683.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:37:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33096-RG | 861 | CG33096-PG | 1..858 | 17..874 | 4290 | 100 | Plus |
| CG33096-RF | 861 | CG33096-PF | 1..858 | 17..874 | 4290 | 100 | Plus |
| CG33096-RE | 861 | CG33096-PE | 1..858 | 17..874 | 4290 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:37:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33096-RG | 3581 | CG33096-RG | 334..1192 | 16..874 | 4295 | 100 | Plus |
| CG33096-RF | 3465 | CG33096-RF | 218..1076 | 16..874 | 4295 | 100 | Plus |
| CG33096-RE | 1701 | CG33096-RE | 334..1192 | 16..874 | 4295 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:37:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25098005..25098469 | 16..480 | 2325 | 100 | Plus |
| 3R | 32079331 | 3R | 25098528..25098713 | 475..660 | 930 | 100 | Plus |
| 3R | 32079331 | 3R | 25098772..25098908 | 658..794 | 685 | 100 | Plus |
| 3R | 32079331 | 3R | 25099194..25099276 | 792..874 | 415 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:37:53 has no hits.
BO20683.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:37:53 Download gff for
BO20683.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33096-RC | 254..1106 | 22..876 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:48:07 Download gff for
BO20683.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33096-RC | 224..1076 | 22..876 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:15:39 Download gff for
BO20683.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33096-RE | 340..1192 | 22..876 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:15:39 Download gff for
BO20683.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25098011..25098469 | 22..480 | 100 | -> | Plus |
| 3R | 25098534..25098713 | 481..660 | 100 | -> | Plus |
| 3R | 25098775..25098907 | 661..793 | 100 | -> | Plus |
| 3R | 25099196..25099276 | 794..876 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:48:07 Download gff for
BO20683.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20923733..20924191 | 22..480 | 100 | -> | Plus |
| arm_3R | 20924256..20924435 | 481..660 | 100 | -> | Plus |
| arm_3R | 20924497..20924629 | 661..793 | 100 | -> | Plus |
| arm_3R | 20924918..20924998 | 794..876 | 97 | | Plus |
BO20683.pep Sequence
Translation from 16 to 892
> BO20683.pep
MFSISELCCMFCCPPCPGPIAAKLAFQPPEPTYKLTPADDTNIRYNLQLF
DRAEWQYSEREKSKVEAFFTRTSRGNLITCIYVRCSKNAKYTLLFSHGNA
VDLGQMSSFYLTLGSQINCNIFGYDYSGYGMSGGKPSEKNLYADIEAAWQ
AMRTRFNISPETIILYGQSIGTVPTVDLASRHEVGAVILHSPLMSGLRVV
FRNTKRTWFFDAFPSIDKVAKVKAPVLVIHGTDDEVIDFSHGIGIYERCP
KTVEPFWVEGAGHNDVELHPHYYERLRKFLSVELVKASFLDH
BO20683.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:55:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33096-PG | 286 | CG33096-PG | 1..286 | 1..286 | 1538 | 100 | Plus |
| CG33096-PF | 286 | CG33096-PF | 1..286 | 1..286 | 1538 | 100 | Plus |
| CG33096-PE | 286 | CG33096-PE | 1..286 | 1..286 | 1538 | 100 | Plus |
| CG33096-PD | 286 | CG33096-PD | 1..286 | 1..286 | 1538 | 100 | Plus |
| CG33096-PC | 286 | CG33096-PC | 1..286 | 1..286 | 1538 | 100 | Plus |
