BO20694.complete Sequence
346 bp assembled on 2009-05-13
GenBank Submission: KX798287
> BO20694.complete
GAAGTTATCAGTCGACATGGTGAACGTACCGAAACAACGCCGCACCTTCT
GCAAGAAGTGCAAGGTCCACAAGCTGCACAAGGTGACGCAGTACAAGAAG
TCCAAGGAGCGCAAGGGAGCTCAGGGCAGGCGTCGTTACGACAGGAAACA
GCAGGGTTTCGGAGGTCAGACCAAGCCCATCTTCAGGAAGAAGGCCAAGA
CCACCAAGAAGATTGTGCTGCGTATGGAGTGCACCGAGTGCAAATACCGC
AAGCAGACTCCCCTGAAGCGTTGCAAGCACTTCGAGCTGGGCGGTGACAA
GAAGCGCAAGGGACAGATGATCCAGTTCGCAAGCTTTCTAGACCAT
BO20694.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:39:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpL36A-RB | 315 | CG7424-PB | 1..312 | 17..328 | 1560 | 100 | Plus |
RpL36A-RA | 315 | CG7424-PA | 1..312 | 17..328 | 1560 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:39:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpL36A-RB | 514 | CG7424-RB | 85..396 | 17..328 | 1560 | 100 | Plus |
RpL36A-RA | 457 | CG7424-RA | 35..346 | 17..328 | 1560 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:39:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8042439..8042614 | 194..19 | 880 | 100 | Minus |
2L | 23513712 | 2L | 8041991..8042127 | 328..192 | 685 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 20:39:28 has no hits.
BO20694.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:37:51 Download gff for
BO20694.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL36A-RA | 32..343 | 17..330 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:12:36 Download gff for
BO20694.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL36A-RA | 35..346 | 17..330 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:25:48 Download gff for
BO20694.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpL36A-RA | 35..346 | 17..330 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:25:48 Download gff for
BO20694.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8041989..8042125 | 194..330 | 98 | <- | Minus |
2L | 8042440..8042615 | 17..193 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:12:36 Download gff for
BO20694.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8041989..8042125 | 194..330 | 98 | <- | Minus |
arm_2L | 8042440..8042615 | 17..193 | 99 | | Minus |
BO20694.pep Sequence
Translation from 16 to 346
> BO20694.pep
MVNVPKQRRTFCKKCKVHKLHKVTQYKKSKERKGAQGRRRYDRKQQGFGG
QTKPIFRKKAKTTKKIVLRMECTECKYRKQTPLKRCKHFELGGDKKRKGQ
MIQFASFLDH
BO20694.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:55:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpL36A-PB | 104 | CG7424-PB | 1..104 | 1..104 | 562 | 100 | Plus |
RpL36A-PA | 104 | CG7424-PA | 1..104 | 1..104 | 562 | 100 | Plus |