BO20713.complete Sequence
745 bp assembled on 2009-05-13
GenBank Submission: KX795549
> BO20713.complete
GAAGTTATCAGTCGACATGGCTAATCCGTTTCGCTGGTGTCGAGTGTCGC
ACGACTGCGTGTTCCAGATTAATGTGGTTCTGGTGGTGGTCGGAGTGATC
TTTCTGCTTGACGTGCTCAGCCACCTTTATCTGAAGGCGGTCATGTTTCC
AGGCCTTCGTCTATACCCGGTAGCCTTGCGCCCCTGGCTCTTTTGGGTGC
GCGCTTTGACAATGGTTGCCTACATTTTGAACGCTGTTCTTGGGATTCAC
ATGGCCCGACAACCCACCGTCTTGAAGTACGCTGGCTATATGCTCGTTGG
AAGCGTGGTGTTGCTGTACACAATAAGCATCGGAGTGACTCGCTTCATGT
ACCGCAAAAGATTCGAGTTCTTTGCCGAGATGCTGGTGCTGCAGATGTGG
GTGAGAGATAGACTTGGCAAGGTTGAAGTAGAGTTCGAGTGCTGCGGAAG
GTCCAGCGTAGTTGACTACCAGACAGCATCGAGCAACCGCACCTGGCCCA
TTGGCTCTTGCTGCGGGAAGCAGAACTGCACCGGCTGCACTGCGAAGCTT
AGCCAGTACCTGTGGACTATCGAGATGGATGTGGCAAGGGATAATATTAT
CGTATCCGTTCTCTTGTTTGTGGCGATGATCGTCATGGTTTTACACTTTA
AAGATGTGCAATCGCTCGACGACACTAGTGATGTGGATGAGTCTTCAGAA
CTGGTAGACGACTCGGACGCCAAAGAAGCAAGCTTTCTAGACCAT
BO20713.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:59:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tsp42A-RB | 714 | CG14468-PB | 1..711 | 17..727 | 3555 | 100 | Plus |
Tsp42A-RA | 714 | CG14468-PA | 1..711 | 17..727 | 3555 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:00:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tsp42A-RB | 1179 | CG14468-RB | 57..771 | 13..727 | 3560 | 99.9 | Plus |
Tsp42A-RA | 936 | CG14468-RA | 57..771 | 13..727 | 3560 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:59:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 5795469..5796183 | 13..727 | 3560 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:59:57 has no hits.
BO20713.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:37:15 Download gff for
BO20713.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tsp42A-RA | 1..711 | 17..729 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:35:04 Download gff for
BO20713.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tsp42A-RA | 61..771 | 17..729 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:30:13 Download gff for
BO20713.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tsp42A-RA | 61..771 | 17..729 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:30:13 Download gff for
BO20713.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 5795473..5796183 | 17..729 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:35:04 Download gff for
BO20713.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 1682978..1683688 | 17..729 | 99 | | Plus |
BO20713.pep Sequence
Translation from 16 to 745
> BO20713.pep
MANPFRWCRVSHDCVFQINVVLVVVGVIFLLDVLSHLYLKAVMFPGLRLY
PVALRPWLFWVRALTMVAYILNAVLGIHMARQPTVLKYAGYMLVGSVVLL
YTISIGVTRFMYRKRFEFFAEMLVLQMWVRDRLGKVEVEFECCGRSSVVD
YQTASSNRTWPIGSCCGKQNCTGCTAKLSQYLWTIEMDVARDNIIVSVLL
FVAMIVMVLHFKDVQSLDDTSDVDESSELVDDSDAKEASFLDH
BO20713.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:54:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tsp42A-PB | 237 | CG14468-PB | 1..237 | 1..237 | 1236 | 100 | Plus |
Tsp42A-PA | 237 | CG14468-PA | 1..237 | 1..237 | 1236 | 100 | Plus |