Clone BO20724 Report

Search the DGRC for BO20724

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:207
Well:24
Vector:pDNR-Dual
Associated Gene/TranscriptCG15876-RA
Protein status:BO20724.pep: Imported from assembly
Sequenced Size:448

Clone Sequence Records

BO20724.complete Sequence

448 bp assembled on 2009-05-13

GenBank Submission: KX799923

> BO20724.complete
GAAGTTATCAGTCGACATGGAAGCCCAACGTAACAACGCCAACCACCGAC
GCGGAGCTCGTCCGAGCGTGGGCTATCTACTTTTTCAGTACCAGAGCGAG
CTGACCCGCCGTCATGCGGAACCCACGCGGCTGTCCCGCACCAAGATTCA
CATAATCGATGGACTGGTGTCCCGCACCATCCGCCACATGAAGCACTGCA
GCATGGAGGATCTGAGGGCCTGCAAGAGGGAGCTCGTCTACAAGGAGCAG
CTGCGCGATCAGCTCAAGAACATGCGACGCAAACGCTCCTCCTCCGTCAA
CAAAGTCGATGCTAGTGCCAACACATCCGCCCCCGTTGTGAGTGTCAAGG
CGCCCTGCACTCCACCGAAACCTCGATCCTCCACAGGAGAGTTCTCCAAG
ATGGACATCTTCGGACCGGAGATCTTCGTTGCAAGCTTTCTAGACCAT

BO20724.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:48:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG15876-RA 417 CG15876-PA 1..414 17..430 2055 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:48:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG15876-RA 641 CG15876-RA 107..520 17..430 2055 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:48:15
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4694326..4694739 430..17 2055 99.8 Minus
Blast to na_te.dros performed on 2014-11-27 06:48:15 has no hits.

BO20724.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:37:47 Download gff for BO20724.complete
Subject Subject Range Query Range Percent Splice Strand
CG15876-RA 85..498 17..432 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:54:46 Download gff for BO20724.complete
Subject Subject Range Query Range Percent Splice Strand
CG15876-RA 107..520 17..432 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:54:49 Download gff for BO20724.complete
Subject Subject Range Query Range Percent Splice Strand
CG15876-RA 107..520 17..432 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:54:49 Download gff for BO20724.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4694324..4694739 17..432 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:54:46 Download gff for BO20724.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4694324..4694739 17..432 99   Minus

BO20724.pep Sequence

Translation from 16 to 448

> BO20724.pep
MEAQRNNANHRRGARPSVGYLLFQYQSELTRRHAEPTRLSRTKIHIIDGL
VSRTIRHMKHCSMEDLRACKRELVYKEQLRDQLKNMRRKRSSSVNKVDAS
ANTSAPVVSVKAPCTPPKPRSSTGEFSKMDIFGPEIFVASFLDH

BO20724.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:55:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG15876-PA 138 CG15876-PA 1..138 1..138 712 100 Plus
CG13713-PA 99 CG13713-PA 8..82 15..89 194 48 Plus
CG13711-PA 127 CG13711-PA 23..119 2..98 158 29.9 Plus
CG13716-PA 117 CG13716-PA 12..94 1..83 135 31.3 Plus