BO20743.complete Sequence
568 bp assembled on 2009-05-13
GenBank Submission: KX795229
> BO20743.complete
GAAGTTATCAGTCGACATGGCAGAAGATTCTGCAGAGGACCAGATTACCT
GGCCGGATGACATTGCCGAGCCAACCTTGGAGTCTGAGTTGACCTGGCCC
AATGAACTTCCGGTAACAGTAACTAATGGCATGACTTTTCGCACCGCTCG
AACCTTGGATCATTTCGATGCTTTGCGAGACGATGACGAGTTCATGGAGA
ACCCGCATAAAAAGGTTTTTGACGAATTTGATAGCCTGGAGCATAGATAC
CACATCGTTCATCCAATAGGTGAAGAAATAGCCCTCAAGCGGAACCCGCT
CCCTGAGGAGAAGTATATCAAGCAGCCCTTCAAGTTCGGCTGCTGTCACA
ACTCCACATATGTGGGATGTGCTGGCGTTTGTCCGGAGACATGCGAATAC
CGCTCCAAATACTGTGTACCGCTTTGCGGACCGCCTTGTCGCTGTAAGCG
TGGTTATGTCTACAATATTCCACATAGCGCATGTACTCTGCGCTCCGACT
GTCCCAAGGGGATCGTTCAGAGTAAGAACGGGATATACAGGGTATTTTTG
GCAAGCTTTCTAGACCAT
BO20743.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:19:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5267-RA | 537 | CG5267-PA | 1..534 | 17..550 | 2670 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:19:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5267-RA | 723 | CG5267-RA | 63..596 | 17..550 | 2670 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:19:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16755163..16755696 | 17..550 | 2670 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:19:22 has no hits.
BO20743.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:38:41 Download gff for
BO20743.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5267-RA | 63..596 | 17..552 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:52:23 Download gff for
BO20743.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5267-RA | 63..596 | 17..552 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:15:54 Download gff for
BO20743.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5267-RA | 63..596 | 17..552 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:15:54 Download gff for
BO20743.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16755163..16755696 | 17..552 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:52:23 Download gff for
BO20743.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12642668..12643201 | 17..552 | 99 | | Plus |
BO20743.pep Sequence
Translation from 16 to 568
> BO20743.pep
MAEDSAEDQITWPDDIAEPTLESELTWPNELPVTVTNGMTFRTARTLDHF
DALRDDDEFMENPHKKVFDEFDSLEHRYHIVHPIGEEIALKRNPLPEEKY
IKQPFKFGCCHNSTYVGCAGVCPETCEYRSKYCVPLCGPPCRCKRGYVYN
IPHSACTLRSDCPKGIVQSKNGIYRVFLASFLDH
BO20743.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:57:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5267-PA | 178 | CG5267-PA | 1..178 | 1..178 | 1003 | 100 | Plus |
| CG34189-PA | 122 | CG34189-PA | 43..121 | 99..177 | 193 | 48.1 | Plus |
| Acp62F-PA | 115 | CG1262-PA | 31..97 | 106..171 | 181 | 50.7 | Plus |
| CG33259-PA | 119 | CG33259-PA | 24..88 | 106..169 | 172 | 50.8 | Plus |
