Clone BO20748 Report

Search the DGRC for BO20748

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:207
Well:48
Vector:pDNR-Dual
Associated Gene/TranscriptCG30324-RA
Protein status:BO20748.pep: Imported from assembly
Sequenced Size:526

Clone Sequence Records

BO20748.complete Sequence

526 bp assembled on 2009-05-13

GenBank Submission: KX796610

> BO20748.complete
GAAGTTATCAGTCGACATGTTTTCCGATCCCGCCCAGGAGTCGGTTGCCA
CGCAGACGGAGGCACAACCGGTTCCGTCGCCCATCTGCACCCCACTGCTG
ATGGTGGACGAGGATGGACGAAAGCGGTACTGCTACCATGGTGGAAAATG
CAAGTGTGCCACTTGCGCACAAATTCGTGCAGAGCAGGCAGTGAAACTCG
ACCAGGAGCTGCTGTCCTACATACCGCACTCGAAGCTCCACCTGGAAGTT
CCAATCCGAATGGCCAAGCCGAAGCAGTATCGCCTGGAAGCTCGACGGGC
TACTCCCGAACTGGCAAAATTTCTGCGGGAGGATCACGAGAGGCTGAGGG
CGGAGTATCCATCGTACTATCTCCCGGATCGATACTTTGGTAAGAAATTC
TACGAGTTGCCAGGACCGCAGCACAAGGAGACCCAGACGGACATTCCGAT
TGGGCGTTACGGCATCGATGGTTGTCCCTGTACCAATAAATCGCTCTGCT
ATGACTTGGCAAGCTTTCTAGACCAT

BO20748.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:12:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG30324-RA 495 CG30324-PA 1..492 17..508 2460 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:12:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG30324-RA 648 CG30324-RA 94..585 17..508 2460 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:12:41
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 16287649..16288140 508..17 2460 100 Minus
Blast to na_te.dros performed on 2014-11-27 15:12:42 has no hits.

BO20748.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:38:42 Download gff for BO20748.complete
Subject Subject Range Query Range Percent Splice Strand
CG30324-RA 101..585 24..510 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:38:34 Download gff for BO20748.complete
Subject Subject Range Query Range Percent Splice Strand
CG30324-RA 101..585 24..510 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:02:29 Download gff for BO20748.complete
Subject Subject Range Query Range Percent Splice Strand
CG30324-RA 101..585 24..510 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:02:29 Download gff for BO20748.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16287647..16288133 24..510 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:38:34 Download gff for BO20748.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12175152..12175638 24..510 99   Minus

BO20748.pep Sequence

Translation from 16 to 526

> BO20748.pep
MFSDPAQESVATQTEAQPVPSPICTPLLMVDEDGRKRYCYHGGKCKCATC
AQIRAEQAVKLDQELLSYIPHSKLHLEVPIRMAKPKQYRLEARRATPELA
KFLREDHERLRAEYPSYYLPDRYFGKKFYELPGPQHKETQTDIPIGRYGI
DGCPCTNKSLCYDLASFLDH

BO20748.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:57:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG30324-PA 164 CG30324-PA 1..164 1..164 895 100 Plus