Clone BO20755 Report

Search the DGRC for BO20755

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:207
Well:55
Vector:pDNR-Dual
Associated Gene/TranscriptCG10584-RA
Protein status:BO20755.pep: Imported from assembly
Sequenced Size:856

Clone Sequence Records

BO20755.complete Sequence

856 bp assembled on 2009-05-13

GenBank Submission: KX793799

> BO20755.complete
GAAGTTATCAGTCGACATGTTCACGGTCACGTCGGAGATCTACGGAGAGA
ACAACTACCAGACGACCCGCGATGGAGGTAAGGTGTTGTCGAAGTTCCGT
TTCGTCTATCCGGAGGAGAAGCTGGCGGGGATTAGGACGGATAAAGACGG
CGACCTTGAGGTGCCAAGGCCGAAACGTGGCGTGATCGAATTGGAACATT
CCGAGGCCACGGAGCTCCGGCTGGTGGGCTTGCAGGTGTGGCGAGGAGCC
CTTCTTCTGGCAGACTACCTTTTCTCCAAAAAGGATGAGTTTTCCCAGAA
AACCCTAATGGAACTGGGAGCTGGTGTCGGCCTGACCAGCATTGCCGCCG
GAATACACAATAACGGAAGGATCTATTGCACGGATGTGGACCTGGGATGC
ATACTGAAGCTGATCCGCGGCAATGTCCAAAGAAATTCAAAACTCCTCCG
CGCTACGATATCAGTTCTGGAGTTTGATTTTCTCGCCTCAAAAGAGGATC
ACTCGCAGGATCTGCTGGAGGCCATAGACAATAGCGATATAATCCTAGCT
GCCGATGTCATCTACTGTGATACGCTAACCGATGCCTTCATCTGCGTCTT
GGATAACCTCCTGGATCGAGGTCGCCAAACTGGGAGACCCAAAACGATAT
ACATGGCACTGGAGAAGCGCTATGTGTTCACACTGGAGGATTGCGATTCG
GTGGCTCCCATGTATGAGTACCTCATCCGGCAGACGGTGAACAAGCCGTG
GATCATGGAGCACCTGCCTCTGGATTTCCCCCAGTATTTCGAGTACGATC
GCTGCAAGCAACTGGTTCTGATGAAGATCATCAGTCGTGCAAGCTTTCTA
GACCAT

BO20755.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:06:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG10584-RA 825 CG10584-PA 1..822 17..838 4110 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:06:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG10584-RA 1081 CG10584-RA 111..933 16..838 4115 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:06:48
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21030428..21031250 838..16 4115 100 Minus
Blast to na_te.dros performed on 2014-11-28 01:06:49 has no hits.

BO20755.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:38:39 Download gff for BO20755.complete
Subject Subject Range Query Range Percent Splice Strand
CG10584-RA 6..822 22..840 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:39:17 Download gff for BO20755.complete
Subject Subject Range Query Range Percent Splice Strand
CG10584-RA 117..933 22..840 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:44:45 Download gff for BO20755.complete
Subject Subject Range Query Range Percent Splice Strand
CG10584-RA 117..933 22..840 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:44:45 Download gff for BO20755.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21030426..21031244 22..840 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:39:17 Download gff for BO20755.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21023526..21024344 22..840 99   Minus

BO20755.pep Sequence

Translation from 16 to 856

> BO20755.pep
MFTVTSEIYGENNYQTTRDGGKVLSKFRFVYPEEKLAGIRTDKDGDLEVP
RPKRGVIELEHSEATELRLVGLQVWRGALLLADYLFSKKDEFSQKTLMEL
GAGVGLTSIAAGIHNNGRIYCTDVDLGCILKLIRGNVQRNSKLLRATISV
LEFDFLASKEDHSQDLLEAIDNSDIILAADVIYCDTLTDAFICVLDNLLD
RGRQTGRPKTIYMALEKRYVFTLEDCDSVAPMYEYLIRQTVNKPWIMEHL
PLDFPQYFEYDRCKQLVLMKIISRASFLDH

BO20755.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:57:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG10584-PA 274 CG10584-PA 1..274 1..274 1418 100 Plus