BO20761.complete Sequence
847 bp assembled on 2009-05-13
> BO20761.complete
GAAGTTATCAGTCGACATGCTCCTAATTGGATTACTAATGCTACTCCATG
CCGGCCTCCAAGGAGCCCAGTGTGTTGCCTTCTACACGGAAAAACCCTCC
TATATTGAGTCCTGCAAGATTTATGAACCGGAGTTCACCAAGTGCTCAAC
TCGTTCAATACAGGCATTTATGAACCAGCTCGTCAAAGGTGTGCCCGAAA
TAGAGGAATCCTTTGGACCCATCGATCCCATGAGGCAGGAACAGCTGGTG
TTCAAGCAGGATAACAGCGACGTGGCCACCCTTTCCGCCAATCTTACGGA
TATGCTGATCAGGGGCTTTGGCAAAATGCTGATCAAGGAGAGCAAAGTCA
GCAAAAAGGATTTCAGCTGGCTAACTAAGATCTACCTGCCCCAAATGCGA
ATAGATGGTCACTACAAAATGGTCGGTCGCATTTTGCTCGTGCCTCTGCA
GGGAAATGGAAAAATAGTCATGGAAATAGATGATCTGGACATACTGATGA
CCACCAAAACACGCCTCTACGAGAAGGGCGGCTATACATTTTACAACGTG
ACATCCGTGAAGGTAAAAGTGGACGTCGGCAAAGTTCGCACCAGATTGGA
TAACCTCTTCAACGGGCACAGCAAGGAGGTGGAAGATAGCACCAATCAGT
TCTTTAACGACAATTGGAAGGATGTCTTCGAGGCACTGCGTCCGCTGGTG
GTTGAAACCGTGGAAAGAACGCTACTAGATCTACTCCACAAGACATTTGC
CCTGTTTCCGGCCAGCTTCTTTGTGGAGGACATACCCACCTCCTTAACCT
TGTATGGTCGCAAGTCACACATGATCACTGCAAGCTTTCTAGACCAT
BO20761.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:55:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17189-RA | 795 | CG17189-PA | 1..792 | 38..829 | 3945 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:55:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17189-RA | 995 | CG17189-RA | 71..884 | 16..829 | 4055 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:55:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 27102455..27102806 | 478..829 | 1760 | 100 | Plus |
3R | 32079331 | 3R | 27101823..27101981 | 187..345 | 795 | 100 | Plus |
3R | 32079331 | 3R | 27102263..27102396 | 346..479 | 655 | 99.3 | Plus |
3R | 32079331 | 3R | 27101673..27101768 | 96..191 | 480 | 100 | Plus |
3R | 32079331 | 3R | 27101476..27101555 | 16..95 | 400 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:55:44 has no hits.
BO20761.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:37:09 Download gff for
BO20761.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17189-RA | 1..792 | 38..831 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:38:53 Download gff for
BO20761.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17189-RA | 72..884 | 17..831 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:13:48 Download gff for
BO20761.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17189-RA | 72..884 | 17..831 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:13:48 Download gff for
BO20761.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 27101825..27101981 | 189..345 | 100 | -> | Plus |
3R | 27102263..27102396 | 346..479 | 99 | -> | Plus |
3R | 27101477..27101555 | 17..95 | 100 | -> | Plus |
3R | 27101673..27101765 | 96..188 | 100 | -> | Plus |
3R | 27102457..27102806 | 480..831 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:38:53 Download gff for
BO20761.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 22927547..22927703 | 189..345 | 100 | -> | Plus |
arm_3R | 22927985..22928118 | 346..479 | 99 | -> | Plus |
arm_3R | 22927199..22927277 | 17..95 | 100 | -> | Plus |
arm_3R | 22927395..22927487 | 96..188 | 100 | -> | Plus |
arm_3R | 22928179..22928528 | 480..831 | 99 | | Plus |
BO20761.pep Sequence
Translation from 16 to 847
> BO20761.pep
MLLIGLLMLLHAGLQGAQCVAFYTEKPSYIESCKIYEPEFTKCSTRSIQA
FMNQLVKGVPEIEESFGPIDPMRQEQLVFKQDNSDVATLSANLTDMLIRG
FGKMLIKESKVSKKDFSWLTKIYLPQMRIDGHYKMVGRILLVPLQGNGKI
VMEIDDLDILMTTKTRLYEKGGYTFYNVTSVKVKVDVGKVRTRLDNLFNG
HSKEVEDSTNQFFNDNWKDVFEALRPLVVETVERTLLDLLHKTFALFPAS
FFVEDIPTSLTLYGRKSHMITASFLDH
BO20761.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:54:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17189-PA | 264 | CG17189-PA | 1..264 | 8..271 | 1365 | 100 | Plus |
CG14259-PA | 289 | CG14259-PA | 36..282 | 20..266 | 885 | 65.2 | Plus |
CG14457-PB | 271 | CG14457-PB | 24..265 | 22..265 | 559 | 43.9 | Plus |
CG14457-PC | 270 | CG14457-PC | 24..264 | 23..265 | 554 | 43.2 | Plus |
CG14457-PA | 144 | CG14457-PA | 1..138 | 127..265 | 373 | 48.9 | Plus |