BO20764.complete Sequence
1051 bp assembled on 2009-05-13
GenBank Submission: KX797591
> BO20764.complete
GAAGTTATCAGTCGACATGCAGAGGATAATCGCTTTGGTGGCCATCATGG
CGTGTGGACTATCGTTCGTGGCAGCTCAGTCATGTCAGACTTGTCTGGAG
CAAAACGATGTGTACTGCGTTGATCAGAACAGCTATCAGAATTGCATGAA
AAATGGTCCAGTTGGAGATATTATCGAATGTCCTTCGGGCACCGTTTGCT
CCAATTCTGATAGCGTTTGTGCTCTGATCTCCGAGGTAAATTCGACCATA
TTGGACGTGTGTGGAGGCTCTGGCGGAAATGGAGCTCAGTGCGAAGTGTG
TTCCTCAGGCGCCAAATACGCCTGTGTCAGCAGCACCCAGTATGCCCGCT
GCTCCTCCGCCGGCGATGTGCTGACCAGCAGTGTGTACAATTGCGGCACA
GATGAGATTTGTATCATAGATGCTCTGTCGACGTATCAAACCGTCTGTGT
ACCGTCTTGTGCCTCCGAATTTCTTGGATTGGATGCCACCTGTAGCAACA
GTATTTATCAGCCAACCACAACAACTACAGTGGCTCCAACGACAACTCCT
AGTGCTGCGCAGAAAGAGGATTTGTGCAATGCTGGCGAGCCTAGTACCAA
TCCTAGTTACTTCTTTACCAGAATAACCGATGACTCCACGTGCAACAGCT
ACCTGTACTGCCAGAAATCTGGAACCACCTGGGTTGCCCTCTATATGACT
TGCGGCGCCTCCACGCCGTTCTTTGATTCAACCACCAGCTCATGTGTGAC
AACCAGGCCGACCAGCTGCTCGGATACAACGACTCAGTCGCCCTCTGATT
CTTCATCGACTGCTTCTTCAACTGAGTCCTCCTCCGAGTCTTCATCAACG
ACTGCTTCATCCACAGCTTCCTCATCAACGGAATCTACACCAACGACTGC
GTCCTCGTCGGCTTCTTCATCTACGGAATCCTCCACCGAGTCTTCTTCCA
CGACTGCTTCCACCACGCAGTCTTCTTCTACGGAATCATCCACACAGTCT
ACCTCAACAACTTCTACGACTACTCCTACTCCTGCAAGCTTTCTAGACCA
T
BO20764.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:34:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13075-RB | 1020 | CG13075-PB | 1..1017 | 17..1033 | 5085 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:34:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13075-RB | 1149 | CG13075-RB | 42..1060 | 15..1033 | 5095 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:34:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16084615..16085175 | 473..1033 | 2805 | 100 | Plus |
| 3L | 28110227 | 3L | 16084238..16084560 | 150..472 | 1615 | 100 | Plus |
| 3L | 28110227 | 3L | 16084034..16084168 | 15..149 | 675 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 23:34:31 has no hits.
BO20764.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:37:08 Download gff for
BO20764.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13075-RA | 1..1017 | 17..1035 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:32:18 Download gff for
BO20764.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13075-RB | 44..1060 | 17..1035 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:03:38 Download gff for
BO20764.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13075-RB | 44..1060 | 17..1035 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:03:38 Download gff for
BO20764.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16084036..16084168 | 17..149 | 100 | -> | Plus |
| 3L | 16084238..16084560 | 150..472 | 100 | -> | Plus |
| 3L | 16084615..16085175 | 473..1035 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:32:18 Download gff for
BO20764.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16077136..16077268 | 17..149 | 100 | -> | Plus |
| arm_3L | 16077338..16077660 | 150..472 | 100 | -> | Plus |
| arm_3L | 16077715..16078275 | 473..1035 | 99 | | Plus |
BO20764.pep Sequence
Translation from 16 to 1051
> BO20764.pep
MQRIIALVAIMACGLSFVAAQSCQTCLEQNDVYCVDQNSYQNCMKNGPVG
DIIECPSGTVCSNSDSVCALISEVNSTILDVCGGSGGNGAQCEVCSSGAK
YACVSSTQYARCSSAGDVLTSSVYNCGTDEICIIDALSTYQTVCVPSCAS
EFLGLDATCSNSIYQPTTTTTVAPTTTPSAAQKEDLCNAGEPSTNPSYFF
TRITDDSTCNSYLYCQKSGTTWVALYMTCGASTPFFDSTTSSCVTTRPTS
CSDTTTQSPSDSSSTASSTESSSESSSTTASSTASSSTESTPTTASSSAS
SSTESSTESSSTTASTTQSSSTESSTQSTSTTSTTTPTPASFLDH
BO20764.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:54:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13075-PB | 339 | CG13075-PB | 1..339 | 1..339 | 1754 | 100 | Plus |
| CG33258-PC | 252 | CG33258-PC | 1..252 | 1..252 | 675 | 50.4 | Plus |
| CG33258-PB | 252 | CG33258-PB | 1..252 | 1..252 | 675 | 50.4 | Plus |
| CG42525-PA | 419 | CG42525-PA | 18..264 | 83..341 | 276 | 32.5 | Plus |
| CG42525-PB | 377 | CG42525-PB | 18..270 | 83..341 | 265 | 32.5 | Plus |
