Clone BO20774 Report

Search the DGRC for BO20774

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:207
Well:74
Vector:pDNR-Dual
Associated Gene/TranscriptCG18095-RA
Protein status:BO20774.pep: Imported from assembly
Sequenced Size:1678

Clone Sequence Records

BO20774.complete Sequence

1678 bp assembled on 2009-05-13

GenBank Submission: KX795817

> BO20774.complete
GAAGTTATCAGTCGACATGTACCTACTACCTGGTAGTCTACTCCTGCTGA
TCTTTAGCTTTAGCCCGAGGTTAAGTTGCCTGCAGTTGAGCAAGTGCAAT
AATACTGAGGTGACCTTAATACGGAAGACGGAGCTCTTGACGTCACTCAC
ATTGAGCAACTGCACGCTGCCGCATGTGGAAAATGGATTTTTCGTACGGT
TTGATCATCTGCTTCATTTAGAACTGCAGCACAGTGGACTGAGTGATTTA
GATGATTTTTCACTGAATGGCTTGACAAAGTTACAATACCTTTCCCTGTC
CCACAACAATCTGAGCAGTCTGAGATCCTGGTCCAGTGAGCCTTTGGGTG
CATTAACCAATTTGGATCTAAGCCACAATATGTTAAGCAAACTGAGTGTC
AAGAGCTTTGAGCAATATCCCCAGTTGCAACAGCTCGACTTGCGTTACAA
TCGGATTAGTCAAATAGAGAATGACTCCTTTGATGGATTATCTCATTTAA
AGCATCTTTATCTGAACGGAAACCAACTGGCGCACATAGATGGTAGTTTC
TTTCGGGGTCTTCATCGGCTATCCAGTTTATCACTGCAGCACAATCGCAT
TGAGTTCATAGAAATGGATTCGTTTGAGAGTAATACCCATCTTCGAAGTC
TACGGCTGGACCAAAATCTCCTGAGCAGTCTTCAGTTTCTCAGTCAACGA
GGTTTGGCTCGACTGGTTCACTTGAATCTATCGAGTAATCTGCTACAAAA
ATTGGAGCCATTTGTATTTTCCAAAAACTTTGAGCTGCAGGACCTAGACT
TGAGTTATAATAACATAACTAAGCTCAACAAGGAAGCATTATCGGGATTG
GATTCTTTGGAGCGCCTCAACATAAGTCATAACTATGTGGATAAAATATA
TGACGAAAGCCTGGACTCCCTAATCGCTCTTCTTCAACTAGATATTAGCT
TCAACCTTCTGACCACACTGCCAGATAATTTATTCCATTTCAACACTCAA
TTGGAAGAGATTATCCTTGCTAATAACAAAATAGAAGAGATATCCTCTCA
GATGATGTTCAATCAAAATCATTTAAGATACATTAAATTGTCGGGAAATG
CAATCAGTGATGCCGCTTTCCTCGACAGGCTTTCTCCATCGGTGAATCGT
TTTACTCTCTACGTGGATCTCAGTTCGAATCGCCTCAAATCGTTGAACCT
CAGCAGTCTTCTTCATTTTCGCTATATAAACTTGGCGGATAATAACTGGA
GCTGCAATTGGTTGGTGGCTAACTTGGTGCAAAAATTACCAAACTCTGTT
AACTTCGCTCGTCCCTGGACTGTAATCAATAATTTGAGTGAAAATACCAC
AAATGTAGAGGGAATAGACTGCATTGAAGGGGGCACTAATCGTTCCATAA
TATTGCTGGATGTAAGTGGCGTGCCACAACCAAAATCAGACAATTGCGAT
TGTGTTGTTGCCTATGATGAGACAAATCCTTCACCTCCACCGCTCACCTG
GCCGAAGATACCAACAGATCGCTTTGATTCACGATCGGTGATCATTTGGA
TGCTGGTGGCCATTGCGATAGCTTTTTCAGGACTTCGTTGGTTGCGACGG
TTCGTGGATCGCAATGAGAAACGTAAACTGGGCCAAAAGATGCTGCATAA
TGTGGTTTGTGCAAGCTTTCTAGACCAT

BO20774.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:02:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG18095-RC 1647 CG18095-PC 1..1644 17..1660 8220 100 Plus
CG18095-RA 1647 CG18095-PA 1..1644 17..1660 8220 100 Plus
CG18095-RB 1695 CG18095-PB 1..1638 17..1654 8190 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:02:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG18095-RC 1677 CG18095-RC 6..1649 17..1660 8220 100 Plus
CG18095-RA 2036 CG18095-RA 6..1649 17..1660 8220 100 Plus
CG18095-RB 1838 CG18095-RB 6..1643 17..1654 8190 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:02:11
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 14030689..14031534 862..17 4230 100 Minus
2L 23513712 2L 14029909..14030506 1458..861 2990 100 Minus
2L 23513712 2L 14029649..14029852 1660..1457 1020 100 Minus
Blast to na_te.dros performed on 2014-11-28 01:02:12 has no hits.

BO20774.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:38:44 Download gff for BO20774.complete
Subject Subject Range Query Range Percent Splice Strand
CG18095-RA 1..1644 17..1662 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:37:04 Download gff for BO20774.complete
Subject Subject Range Query Range Percent Splice Strand
CG18095-RA 6..1649 17..1662 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:42:48 Download gff for BO20774.complete
Subject Subject Range Query Range Percent Splice Strand
CG18095-RA 6..1649 17..1662 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:42:48 Download gff for BO20774.complete
Subject Subject Range Query Range Percent Splice Strand
2L 14029647..14029852 1457..1662 99 <- Minus
2L 14029911..14030504 863..1456 100 <- Minus
2L 14030689..14031534 17..862 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:37:04 Download gff for BO20774.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 14029647..14029852 1457..1662 99 <- Minus
arm_2L 14029911..14030504 863..1456 100 <- Minus
arm_2L 14030689..14031534 17..862 100   Minus

BO20774.pep Sequence

Translation from 16 to 1678

> BO20774.pep
MYLLPGSLLLLIFSFSPRLSCLQLSKCNNTEVTLIRKTELLTSLTLSNCT
LPHVENGFFVRFDHLLHLELQHSGLSDLDDFSLNGLTKLQYLSLSHNNLS
SLRSWSSEPLGALTNLDLSHNMLSKLSVKSFEQYPQLQQLDLRYNRISQI
ENDSFDGLSHLKHLYLNGNQLAHIDGSFFRGLHRLSSLSLQHNRIEFIEM
DSFESNTHLRSLRLDQNLLSSLQFLSQRGLARLVHLNLSSNLLQKLEPFV
FSKNFELQDLDLSYNNITKLNKEALSGLDSLERLNISHNYVDKIYDESLD
SLIALLQLDISFNLLTTLPDNLFHFNTQLEEIILANNKIEEISSQMMFNQ
NHLRYIKLSGNAISDAAFLDRLSPSVNRFTLYVDLSSNRLKSLNLSSLLH
FRYINLADNNWSCNWLVANLVQKLPNSVNFARPWTVINNLSENTTNVEGI
DCIEGGTNRSIILLDVSGVPQPKSDNCDCVVAYDETNPSPPPLTWPKIPT
DRFDSRSVIIWMLVAIAIAFSGLRWLRRFVDRNEKRKLGQKMLHNVVCAS
FLDH

BO20774.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:57:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG18095-PC 548 CG18095-PC 1..548 1..548 2819 100 Plus
CG18095-PA 548 CG18095-PA 1..548 1..548 2819 100 Plus
CG18095-PB 564 CG18095-PB 1..546 1..546 2806 100 Plus
lbk-PB 1252 CG8434-PB 301..690 25..428 358 29.3 Plus
conv-PA 1092 CG8561-PA 253..615 46..412 333 28.3 Plus
lbk-PB 1252 CG8434-PB 361..658 17..308 243 26.8 Plus