BO20791.complete Sequence
919 bp assembled on 2009-05-13
GenBank Submission: KX796791
> BO20791.complete
GAAGTTATCAGTCGACATGCGCAACGCCCATCCACAGCTGGAGCAACTGC
AGCAGGAGCTGCGCGACCTAATCTGCGAGCTGTGCAACCGGCAGTACAGC
ACAAAGAATGCCTTGGGCGAGCATTTAAAGCGTCATGCCCAGCGCAAGGA
GCACGTGTGCGAGCACTGTGGAGTGGCCAAGGTGACCCGAACGGAGCTAC
TGACCCACCTGCGCACCCACAATCCCACCTGGGAGCGCTTCAAGTGCGAG
CAGTGTCCGCAGCTCTTTCGCCACAAGAGCGCCATTAGCCGGCATGTTCG
GGTGGTCCACGAGGGTCAGCGGCGGTTCCAGTGCGGTCATTGCGAGAAAA
AGTTTGGCACGCATGCCTCGCAGGTGCGGCACGAGCGGCTGCACACGGAA
TCCACGGGCTCGGGAGAGGCAGCCGAGGAATGGCCCTTTGCCTGTATTCA
CTGCCAGAAGCCTTGCGTTTCGCGACAAACCCTTGAGTTGCACCTACGAA
GGCACCGCGCGAGAAAGACGCACAGAAAACGAAGGGAGCACAGTCGGGAG
AGTCAGGAGCAGGAGCAGGAGCACGACCGCGATCAGGAGCAGGGCGCTCG
GGAAGCTCAACAGGATCAGCTCCGCAAGGGGGAAAAGCTACGGCAGAGAG
ATCTCTCCAGGGAAAGCCACCGAAATGAGGTGACCATGCAGACAAGCCAG
CGGCCAAATGAGTGTCAACAAGGTCAAGAGTCCTACGATCCGGAACCGGA
TCCGCTGGAGGCAAGTCAGTGCAAGCTAGAGCAGGAAGATGCACTCGATC
CGGAATGGCAGCACAAAATAGAGCAGGACGCAGAATCGCAAGACTCGGCG
CGACTGGAAGGGCATTTCCATGACTACAAACCTATCCCTTCGAAAGCCTT
AGCAAGCTTTCTAGACCAT
BO20791.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:57:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1529-RD | 1539 | CG1529-PD | 650..1536 | 15..901 | 4435 | 100 | Plus |
| CG1529-RC | 1539 | CG1529-PC | 650..1536 | 15..901 | 4435 | 100 | Plus |
| CG1529-RA | 888 | CG1529-PA | 1..885 | 17..901 | 4425 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:57:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1529-RD | 3235 | CG1529-RD | 741..1627 | 15..901 | 4435 | 100 | Plus |
| CG1529-RC | 1815 | CG1529-RC | 741..1627 | 15..901 | 4435 | 100 | Plus |
| CG1529-RA | 3246 | CG1529-RA | 752..1638 | 15..901 | 4435 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:57:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21030260..21031146 | 901..15 | 4435 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:57:41 has no hits.
BO20791.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:40:07 Download gff for
BO20791.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1529-RB | 755..1639 | 17..903 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:29:50 Download gff for
BO20791.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1529-RA | 754..1638 | 17..903 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:00:11 Download gff for
BO20791.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1529-RA | 754..1638 | 17..903 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:00:11 Download gff for
BO20791.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21030257..21031144 | 17..903 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:29:50 Download gff for
BO20791.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20901284..20902171 | 17..903 | 99 | | Minus |
BO20791.pep Sequence
Translation from 16 to 919
> BO20791.pep
MRNAHPQLEQLQQELRDLICELCNRQYSTKNALGEHLKRHAQRKEHVCEH
CGVAKVTRTELLTHLRTHNPTWERFKCEQCPQLFRHKSAISRHVRVVHEG
QRRFQCGHCEKKFGTHASQVRHERLHTESTGSGEAAEEWPFACIHCQKPC
VSRQTLELHLRRHRARKTHRKRREHSRESQEQEQEHDRDQEQGAREAQQD
QLRKGEKLRQRDLSRESHRNEVTMQTSQRPNECQQGQESYDPEPDPLEAS
QCKLEQEDALDPEWQHKIEQDAESQDSARLEGHFHDYKPIPSKALASFLD
H
BO20791.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:17:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1529-PA | 295 | CG1529-PA | 1..295 | 1..295 | 1611 | 100 | Plus |
| CG1529-PD | 512 | CG1529-PD | 218..512 | 1..295 | 1611 | 100 | Plus |
| CG1529-PC | 512 | CG1529-PC | 218..512 | 1..295 | 1611 | 100 | Plus |
| D19A-PA | 845 | CG10269-PA | 406..542 | 20..166 | 282 | 41.9 | Plus |
| D19B-PA | 774 | CG10270-PA | 378..514 | 20..166 | 268 | 39.2 | Plus |
