BO20840.complete Sequence
1009 bp assembled on 2009-05-13
GenBank Submission: KX799021
> BO20840.complete
GAAGTTATCAGTCGACATGCAAAGTAAACACCGCAAACTGCTGCTGCGCT
GCCTCCTGGTGCTGCCCCTCATCCTTCTGGTGGACTATTGCGGCCTGCTG
ACCCACCTGCACGAGCTGAACTTCGAGCGGCACTTTCACTACCCGCTGAA
CGATGACACTGGATCTGGGTCCGCATCCTCTGGACTGGACAAGTTCGCCT
ACCTGCGAGTGCCCTCGTTCACGGCAGAGGTGCCGGTTGACCAGCCTGCG
CGGCTCACGATGCTCATAAAGAGCGCGGTGGGCAATTCGCGACGTCGGGA
GGCCATTCGCCGGACTTGGGGCTACGAGGGTCGATTCTCAGACGTCCATC
TGCGTCGCGTGTTCCTGCTGGGCACGGCCGAGGATAGTGAGAAAGACGTG
GCTTGGGAGTCCCGCGAGCATGGCGACATTCTGCAGGCGGAGTTCACGGA
CGCCTACTTCAACAACACGCTGAAAACCATGCTGGGTATGCGCTGGGCTA
GCGATCAGTTCAATCGCAGCGAGTTCTATCTTTTCGTGGACGACGACTAC
TATGTTTCGGCCAAGAACGTGCTCAAGTTTCTGGGCAGGGGGCGTCAGAG
CCACCAGCCGGAGTTGCTGTTCGCCGGGCACGTGTTTCAGACATCCCCGC
TCCGCCACAAGTTCAGCAAGTGGTACGTTTCGTTGGAGGAATACCCCTTC
GATCGGTGGCCACCGTACGTGACCGCCGGCGCGTTCATTCTGTCGCAGAA
GGCACTGCGCCAGCTGTATGCCGCCAGCGTTCACCTGCCGCTCTTCCGGT
TCGACGACGTCTACCTGGGCATAGTGGCCTTGAAAGCGGGCATTTCCCTT
CAGCACTGCGACGACTTCCGCTTCCATCGGCCGGCGTACAAAGGTCCGGA
CAGCTATAGTTCGGTGATAGCCTCGCACGAATTCGGCGATCCCGAGGAGA
TGACGCGGGTATGGAACGAGTGCCGATCCGCCAATTACGCGGCAAGCTTT
CTAGACCAT
BO20840.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:18:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| brn-RA | 978 | CG4934-PA | 1..975 | 17..991 | 4875 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:18:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| brn-RA | 1450 | CG4934-RA | 139..1119 | 11..991 | 4890 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:18:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4104480..4105460 | 11..991 | 4890 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:18:08 has no hits.
BO20840.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:38:30 Download gff for
BO20840.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| brn-RA | 143..1117 | 17..993 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:21:58 Download gff for
BO20840.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| brn-RA | 143..1117 | 17..993 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:29:33 Download gff for
BO20840.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| brn-RA | 145..1119 | 17..993 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:29:33 Download gff for
BO20840.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4104486..4105460 | 17..993 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:21:58 Download gff for
BO20840.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 3998519..3999493 | 17..993 | 99 | | Plus |
BO20840.pep Sequence
Translation from 16 to 1009
> BO20840.pep
MQSKHRKLLLRCLLVLPLILLVDYCGLLTHLHELNFERHFHYPLNDDTGS
GSASSGLDKFAYLRVPSFTAEVPVDQPARLTMLIKSAVGNSRRREAIRRT
WGYEGRFSDVHLRRVFLLGTAEDSEKDVAWESREHGDILQAEFTDAYFNN
TLKTMLGMRWASDQFNRSEFYLFVDDDYYVSAKNVLKFLGRGRQSHQPEL
LFAGHVFQTSPLRHKFSKWYVSLEEYPFDRWPPYVTAGAFILSQKALRQL
YAASVHLPLFRFDDVYLGIVALKAGISLQHCDDFRFHRPAYKGPDSYSSV
IASHEFGDPEEMTRVWNECRSANYAASFLDH
BO20840.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:56:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| brn-PA | 325 | CG4934-PA | 1..325 | 1..325 | 1732 | 100 | Plus |
| CG8668-PB | 585 | CG8668-PB | 341..570 | 79..311 | 270 | 28.5 | Plus |
| CG8668-PA | 585 | CG8668-PA | 341..570 | 79..311 | 270 | 28.5 | Plus |
| CG11357-PD | 434 | CG11357-PD | 125..349 | 74..280 | 258 | 31.6 | Plus |
| CG11357-PC | 434 | CG11357-PC | 125..349 | 74..280 | 258 | 31.6 | Plus |
