BO20852.complete Sequence
1000 bp assembled on 2009-05-13
GenBank Submission: KX795856
> BO20852.complete
GAAGTTATCAGTCGACATGAACGGGAGTCACCTTCAAACGGAGCAGTTGC
TCTTTGAGGAGAGGCCACTCCATGTGCCGCCCCTCTCGGAACTGAAAAGA
GTCATACAGGGTGCTCTGGATGAGAACTTTCGGACCGTAGATGTCAGTGT
GGAAGCTTGCCCGGATTTAAGGGACTCCCAGTTTGGCCTTGTGGAGCGTG
GACTGGGCGGAAAGGCCACTCTCCTAGAAGCAGGAGGGCCACCCTATTTG
CGGCCCTTGGTGCAGCGAGATAAGCTCTACAATCTGAAGGAGATCACTCG
GCGGACCCAAGGAGCAGGAAAGATCTTTGCAGTTGGACCGGGAGCAGGTC
CGTGGCCCATTCGTCACTCCAATTGCGAGGGGATCTTTAATTTCTCGCTA
AACGAAGAGGATGAACTCACTCAAGGAAGCTACACGGCCACTGTGAGGGG
AGCGAATGAGGATTGTGTTCTCGAAAGGATTCCCGAAACCGAATCTCGTG
CTGCTCTGATCCTGAACCTCTTCCTCAGCGAGGGAAAACCAGGTCAAGTG
CTCCGAATTTCCGCAAAACAGCGCACTGGAGGGGAAAACTTTGTAGAATG
CATTCGCAAGGGTCTGGAACGGCACTACGGAGACCAGGTGGTGGGCTTGG
GAGGAATGTTCGTGGTCAGGAGGGGATGTGTCCACCAGCACGTAATGCGA
GATTTTAGCAAGACGCCCATCCACACACAGGAACAGATCCAAAACTGGTT
GAAGTTCTACGAAATGCCCGCCCAGCTAAACGCAGTGGGCACCTTGGTGA
CCAAGGACATGGGACTGGACCTCCGCCTGCAGCACTTCCACTCGTTTTCC
TTTGCAAACTGGGGAGGCCACTATCACTACGACACCACGCCGGACATTGT
GGAGTACGAGGCCTATCTGAACGTGGCCGAAAGAGTGATCCGTGTGGACA
GACCCGTGGCGACCGATCAGTTGGGCAGAGATGCAAGCTTTCTAGACCAT
BO20852.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:50:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32335-RB | 969 | CG32335-PB | 1..966 | 17..982 | 4830 | 100 | Plus |
| CG9119-RA | 969 | CG9119-PA | 22..944 | 38..960 | 1135 | 74.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:50:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32335-RB | 1082 | CG32335-RB | 70..1036 | 16..982 | 4835 | 100 | Plus |
| CG9119-RA | 1212 | CG9119-RA | 178..1100 | 38..960 | 1135 | 74.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:50:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1201917..1202799 | 982..100 | 4415 | 100 | Minus |
| 3L | 28110227 | 3L | 1203428..1204247 | 960..141 | 1115 | 75.7 | Minus |
| 3L | 28110227 | 3L | 1202882..1202967 | 101..16 | 430 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:50:31 has no hits.
BO20852.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:38:27 Download gff for
BO20852.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32335-RB | 65..1030 | 17..984 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:00:38 Download gff for
BO20852.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32335-RB | 71..1036 | 17..984 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:27:31 Download gff for
BO20852.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32335-RB | 71..1036 | 17..984 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:27:31 Download gff for
BO20852.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1201914..1202797 | 102..984 | 99 | <- | Minus |
| 3L | 1202882..1202966 | 17..101 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:00:38 Download gff for
BO20852.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1201914..1202797 | 102..984 | 99 | <- | Minus |
| arm_3L | 1202882..1202966 | 17..101 | 100 | | Minus |
BO20852.pep Sequence
Translation from 16 to 1000
> BO20852.pep
MNGSHLQTEQLLFEERPLHVPPLSELKRVIQGALDENFRTVDVSVEACPD
LRDSQFGLVERGLGGKATLLEAGGPPYLRPLVQRDKLYNLKEITRRTQGA
GKIFAVGPGAGPWPIRHSNCEGIFNFSLNEEDELTQGSYTATVRGANEDC
VLERIPETESRAALILNLFLSEGKPGQVLRISAKQRTGGENFVECIRKGL
ERHYGDQVVGLGGMFVVRRGCVHQHVMRDFSKTPIHTQEQIQNWLKFYEM
PAQLNAVGTLVTKDMGLDLRLQHFHSFSFANWGGHYHYDTTPDIVEYEAY
LNVAERVIRVDRPVATDQLGRDASFLDH
BO20852.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:56:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32335-PB | 322 | CG32335-PB | 1..322 | 1..322 | 1702 | 100 | Plus |
| CG9119-PA | 322 | CG9119-PA | 1..322 | 1..322 | 1350 | 76.7 | Plus |
