Clone BO20854 Report

Search the DGRC for BO20854

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:208
Well:54
Vector:pDNR-Dual
Associated Gene/TranscriptCG14014-RB
Protein status:BO20854.pep: Imported from assembly
Sequenced Size:1018

Clone Sequence Records

BO20854.complete Sequence

1018 bp assembled on 2009-05-13

GenBank Submission: KX798649

> BO20854.complete
GAAGTTATCAGTCGACATGGCTCAGTCCACGAATTCCAAGAAGCTGATGA
TGTTCCGCACTCCCAACGAGGAGGAGGCCCTGAAGAATCAGATCTTCATC
TTTAACTCGCCCATTGACTACAAGGACCAGCAGCTGATCGTGTACCAGAA
ACCAGGCATCCTCACCGGAGACAAGGACTACGGCTACTGCGTGGTGTACA
AGCGAGATCACTACGTGCTCAATAACCCGCCCAACTTCAAGAGCCCCACG
AAGAGGAGCTTCCTCAACGAATGCATCCGCCAGTTGTATCTGATGAACGG
CATGGGTCACAAGATGTACTGGAGGACTACAAGTGCAATGGCGCTGAGTA
CACCCGGCGAAGTGTGGCACCAGGTGAACAGTTGCCTGCTCCCAGAACGA
CTGACGCCGCAAAAGGAGAGCCTGAAGCGGGTGAAGAGGCAACTTTTCCG
GGATCCACGGGCAGATCGCAAGAATCCCAACCCACTCAAAGGCAAATGCT
GGGGCACCCAAGTCTTCTGCTTCAAATCGATGCGCGAGAAGATTGGCAGG
AAGTACATCCGCCGGGGCTATCTGACCATCGCACGCCGCGAAGCCCTGCA
GGAGATGATCCGTGAGCACTTGGCACGAGAAATGGTCTGCACTCCGGCCG
CATGCAGAACGGTAATCAGCGCCTCCGACGGAATCTTCAATGTGAATGCC
GGTGTCATCGGCGACATCTGTAGCTACCACAGCCACGCGGCTCGCCATCA
GCCCGTCGTGGAGCGCCGTCTGACGGCCGGCGAAGCACGTCTCCGGAACA
ACGAGGCCTGTCGCCTGACTCAGCGGGCCAAGCGGCTGGAGGCCATGTTC
ATACACGAACAAGTGCGACGGGCCGTCCAGAACCACCAGCTCATTCTGGA
GGAGTCGGTGCGATCCATCTACTATGCCAAGGAGCTCTTCCGCCTTATCG
AGGATCACGAGGAGTTCGTCTACACGGACAACAAGATCCTGTCTAGAATC
GCAAGCTTTCTAGACCAT

BO20854.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:31:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG14014-RB 987 CG14014-PB 1..984 17..1000 4920 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:31:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG14014-RB 1127 CG14014-RB 28..1012 16..1000 4925 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:30:59
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5549824..5550808 1000..16 4925 100 Minus
Blast to na_te.dros performed on 2014-11-27 08:31:00 has no hits.

BO20854.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:40:14 Download gff for BO20854.complete
Subject Subject Range Query Range Percent Splice Strand
CG14014-RB 29..1012 17..1002 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:59:40 Download gff for BO20854.complete
Subject Subject Range Query Range Percent Splice Strand
CG14014-RB 29..1012 17..1002 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:20:51 Download gff for BO20854.complete
Subject Subject Range Query Range Percent Splice Strand
CG14014-RB 29..1012 17..1002 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:20:51 Download gff for BO20854.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5549820..5550807 17..1002 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:59:40 Download gff for BO20854.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5549820..5550807 17..1002 99   Minus

BO20854.pep Sequence

Translation from 16 to 1018

> BO20854.pep
MAQSTNSKKLMMFRTPNEEEALKNQIFIFNSPIDYKDQQLIVYQKPGILT
GDKDYGYCVVYKRDHYVLNNPPNFKSPTKRSFLNECIRQLYLMNGMGHKM
YWRTTSAMALSTPGEVWHQVNSCLLPERLTPQKESLKRVKRQLFRDPRAD
RKNPNPLKGKCWGTQVFCFKSMREKIGRKYIRRGYLTIARREALQEMIRE
HLAREMVCTPAACRTVISASDGIFNVNAGVIGDICSYHSHAARHQPVVER
RLTAGEARLRNNEACRLTQRAKRLEAMFIHEQVRRAVQNHQLILEESVRS
IYYAKELFRLIEDHEEFVYTDNKILSRIASFLDH

BO20854.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:18:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG14014-PB 328 CG14014-PB 1..328 1..328 1732 100 Plus