BO20855.complete Sequence
1111 bp assembled on 2009-05-13
> BO20855.complete
GAAGTTATCAGTCGACATGTTAACGTTTTGGGAAAAGACATCAAAAAAAT
CAGCAGATATACCAAACCAAATCAGCGGAGCACTTGCATCAAGTAACTTA
GCTATCTGCGCCTGTCTAATAGTAATCTTCATTGCATCTGTAACCACGGC
CAAAACACCGGATCAGGAAGCTATCCATCACAAAAATGACGAATTTCCGG
AAGAGGAAAGCGACATGGTGATGGAGCCAAATGATTTTTCGCCAATCACT
GTACTAAAGTCACATGAACAACACTTTCATATGCCGCCCACAACGCATCT
TCAGCCACAAGTTCAAGCTAGAATTCATCCTAGAGTTCAACCCAGAAAAT
TTCAATCCGCACTCCAACAAAATGCTGAGGAGCCATTCCGGCCCATTGCT
AATCCAAATACGAAGATTGTTGGCGATTCTCATACGCAGGCTGCCCAAAA
TTTCTACCCACCTTTCTACCATGAGGCTCCTCCACTGGGCCATTCCAGAC
CTTACTTTGGTCACGGCCCGCCTGTATCGGAAACAACTCCTTTATCCTTA
CCCCTTCCGCTCTTGACAACTCAACAGCAACAGCCAGCAACTCAGCAGCG
GACTTTCGATGCCAGTATACTTGGAAGTGGGGATTTTGGTGTCCTTAGAG
GTGGAACCTTCTATCCGGAGGAGGAAATGCCCTATCACCCCGAAGATAAC
AGTGATTACATCTATGGAGATGCTAACAATGGACACGGTCGACCATCTGA
GGGTTTTGTTCAAAAGTACACGTATCCAGAGGAGCAGTTCGCTAATTTTC
GCGATTTTGCCGATATCAACACGCCCGCCGATACGGCGTTTTCGCAATTT
GTGGTGGTGTATGCGGCCAAAAATGCCTCTGTACCACACTCTCATCCGCA
TCCTAAAAACATATTTGAACAGTTAGAGCAGCTGGACAGGGAAAAAGAGC
TGAAAAATACCGAATTTGAGAACAAAACTTCTTCGAAAATAAAGTCGAAA
TTGTCTAATACAAAGTTGCAAAAAAAATACCGAAAAAAAACGGCCCCCAA
AGTCCAGGATCCTCAAGAAATAGAGCCTTTACTAGCTCTAAGTGCAAGCT
TTCTAGACCAT
BO20855.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:44:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32816-RF | 1137 | CG32816-PF | 58..1134 | 17..1093 | 5385 | 100 | Plus |
| CG32816-RE | 1137 | CG32816-PE | 58..1134 | 17..1093 | 5385 | 100 | Plus |
| CG32816-RA | 1137 | CG32816-PA | 58..1134 | 17..1093 | 5385 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:44:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32816-RF | 1834 | CG32816-RF | 310..1386 | 17..1093 | 5385 | 100 | Plus |
| CG32816-RE | 1730 | CG32816-RE | 206..1282 | 17..1093 | 5385 | 100 | Plus |
| CG32816-RA | 1821 | CG32816-RA | 297..1373 | 17..1093 | 5385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:44:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 317024..317929 | 1093..188 | 4530 | 100 | Minus |
| X | 23542271 | X | 333565..333736 | 188..17 | 860 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:44:10 has no hits.
BO20855.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:38:25 Download gff for
BO20855.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32816-RA | 300..1371 | 22..1095 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:53:50 Download gff for
BO20855.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32816-RB | 286..1357 | 22..1095 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:25:23 Download gff for
BO20855.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32816-RA | 302..1373 | 22..1095 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:25:23 Download gff for
BO20855.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 317022..317928 | 189..1095 | 99 | <- | Minus |
| X | 333565..333731 | 22..188 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:53:50 Download gff for
BO20855.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 211055..211961 | 189..1095 | 99 | <- | Minus |
| arm_X | 227598..227764 | 22..188 | 100 | | Minus |
BO20855.pep Sequence
Translation from 16 to 1111
> BO20855.pep
MLTFWEKTSKKSADIPNQISGALASSNLAICACLIVIFIASVTTAKTPDQ
EAIHHKNDEFPEEESDMVMEPNDFSPITVLKSHEQHFHMPPTTHLQPQVQ
ARIHPRVQPRKFQSALQQNAEEPFRPIANPNTKIVGDSHTQAAQNFYPPF
YHEAPPLGHSRPYFGHGPPVSETTPLSLPLPLLTTQQQQPATQQRTFDAS
ILGSGDFGVLRGGTFYPEEEMPYHPEDNSDYIYGDANNGHGRPSEGFVQK
YTYPEEQFANFRDFADINTPADTAFSQFVVVYAAKNASVPHSHPHPKNIF
EQLEQLDREKELKNTEFENKTSSKIKSKLSNTKLQKKYRKKTAPKVQDPQ
EIEPLLALSASFLDH
BO20855.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:56:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32816-PF | 378 | CG32816-PF | 20..378 | 1..359 | 1912 | 100 | Plus |
| CG32816-PE | 378 | CG32816-PE | 20..378 | 1..359 | 1912 | 100 | Plus |
| CG32816-PA | 378 | CG32816-PA | 20..378 | 1..359 | 1912 | 100 | Plus |
| CG32816-PB | 378 | CG32816-PB | 20..378 | 1..359 | 1912 | 100 | Plus |
| CG32816-PD | 293 | CG32816-PD | 1..293 | 67..359 | 1573 | 100 | Plus |
