BO20859.complete Sequence
2374 bp assembled on 2010-10-20
GenBank Submission: KX794359
> BO20859.complete
GAAGTTATCAGTCGACATGGCCCAACCACAGCTGCTGCAAATCAAATTGT
CACGTTTCGATGCCCAACCCTGGGGATTCCGCCTTCAGGGGGGCACGGAC
TTCGCTCAGCCCCTGCTGGTGCAAAAGGTGAACGCCGGCAGCTTGTCCGA
GCAGGCTGGCCTCCAGCCCGGCGATGCGGTGGTCAAGATCAATGACGTGG
ATGTCTTCAATCTGCGTCACAAGGATGCCCAGGACATTGTGGTGCGCTCC
GGCAACAACTTTGTCATCACAGTGCAGCGCGGTGGCTCCACCTGGCGCCC
GCATGTGACACCGACTGGCAATGTGCCGCAGCCCAACTCGCCGTATCTGC
AGACGGTGACGAAGACCTCTCTGGCTCACAAACAACAGGACAGCCAGCAC
ATCGGCTGTGGCTACAACAACGCGGCCCGTCCCTTCTCCAACGGCGGCGA
TGGCGGCGTGAAGAGCATTGTCAATAAACAATACAACACCCCGGTTGGCA
TTTACAGCGATGAATCTATTGCGGAAACACTCTCGGCCCAGGCGGAGGTT
TTGGCTGGCGGTGTGCTCGGCGTCAACTTCAAGAAGAACGAGAAGGAATA
CCAGGGCGATCGCTCCGAGGTTCTGAAGTTCCTGCGCGAGGAGGAGACCG
GCCAGTCCACTCCAGAACCACACAGTCCCGCCAACTTCTACTGGACACAG
AGCCACGCAATCGGCGGCAACGAGCGACGCACTCCACTGCACCACCAGCA
CCAGCAGCCTCAGCAGGATGAGCGGATTGGTGTACCATTGCAGTCAAATA
CACTGGCGCCGGAGGCGACACACAGGCCCAGCTTGCCGGTGGCCCCGAAG
GATAACGAGGAGCAGGCCAGACAGGATCAGCAGGAGCAGCCCGATCCGCG
CATCATTGTGCTGCCCATCTGCCCCGGCCTCCAGGGGCCCGAGTATAAGG
CTGAAATGGAGGCTGCAGCCGCGGCACTGGCCACCGACCAGGATGGACGA
CCACGTCCATTGGCCGCCAGCGGACATCCGGCCTGCCAGCTGTGCGGCGT
GGGCATTGTTGGCGTTTTCGTGCGCATCAAGGATAAGAACCTGCACGTGG
AGTGCTTCAAGTGTGCCACGTGTGGCACCTCGCTGAAGAACCAGGGCTAC
TACAACTTCAACAACAAGCTCTACTGCGACATCCACGCCAAACAGGCCGC
CATCAACAATCCCCCCACCGGCACCGAGGGCTACGTCCCCGTTCCCATCA
AGCCCAACACCAAGCTGAGTGCCTCCACCATCTCATCGGCCTTGAACTCG
CACGGATACGGTGGCCACTCGAACGGCTACTCCAATGGAAACTCCACCCC
TGCTCCGGCACCGGTGAACCAGGGCTATGCTCGTCCGTTCGGTGCCGCCG
CTCCCAAGTCGCCGGTGTCGTATCCGCCGCAGCAGCAACAGCAGTCGCCG
CGTCCCGCTCCCGGTGGCCAAAACCCGTACGCCACCCTGCCCCGCAGCAA
TGTGGGCCAACAAGGTCGTAATGTAAGGTACCAACAACAGCAACAACAGC
AGCAGCAATACAACAATCAGCAGAAGCAGCAGTATAGGAACTCTTACCCC
ATGGGATCTAATTATAGCACCCCGAGTCAGTCCCCCTACATCACCTCCAA
CACCAACAACTATAGCAGCAGCAACAGCTACAATAACAACAACTATAGCA
ACTACAACAATAATAATGTGTACCGAGGTGCCGGAGGAAAGAGCGCTGGC
GCCTTTGGAGCCACCTCGGCGCCCAAGAGGGGCAGGGGTATCCTGAATAA
GGCAGCCGGACCCGGAGTGCGCATCCCACTGTGCAACAGCTGCAATGTGC
AGATCAGAGGACCCTTTATCACGGCATTGGGCCGCATCTGGTGCCCGGAT
CATTTCATCTGCGTGAACGGCAACTGCCGTCGTCCGCTGCAGGACATTGG
ATTCGTTGAGGAGAAGGGCGATCTGTACTGCGAGTACTGTTTCGAGAAGT
ACCTGGCGCCCACTTGCAGCAAGTGCGCTGGCAAGATCAAGGGTGACTGT
TTGAATGCCATTGGCAAACACTTCCATCCGGAGTGCTTCACCTGCGGCCA
GTGCGGCAAGATCTTTGGCAACAGGCCCTTCTTCCTGGAGGATGGAAACG
CGTACTGCGAGGCCGATTGGAACGAGTTGTTCACCACCAAGTGCTTCGCC
TGCGGCTTCCCCGTGGAAGCTGGCGACAGATGGGTGGAGGCCTTGAACCA
CAACTACCATAGCCAATGCTTCAACTGCACGTTCTGCAAACAGAACCTGG
AGGGTCAGAGCTTCTACAACAAGGGCGGACGTCCCTTCTGCAAGAATCAC
GCGCGCGCAAGCTTTCTAGACCAT
BO20859.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:11:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zasp52-RE | 2343 | CG30084-PE | 1..2340 | 17..2356 | 11700 | 100 | Plus |
| Zasp52-RN | 3804 | CG30084-PN | 1..1711 | 17..1727 | 8555 | 100 | Plus |
| Zasp52-RO | 1548 | CG30084-PO | 1..1500 | 17..1516 | 7500 | 100 | Plus |
| Zasp52-RN | 3804 | CG30084-PN | 3171..3801 | 1726..2356 | 3155 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:11:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zasp52-RE | 3176 | CG30084-RE | 206..2545 | 17..2356 | 11700 | 100 | Plus |
| Zasp52-RN | 4637 | CG37-RN | 206..1916 | 17..1727 | 8555 | 100 | Plus |
| Zasp52-RO | 1963 | CG37-RO | 206..1705 | 17..1516 | 7500 | 100 | Plus |
| Zasp52-RN | 4637 | CG37-RN | 3376..4006 | 1726..2356 | 3155 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:11:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15779265..15779661 | 1059..663 | 1985 | 100 | Minus |
| 2R | 25286936 | 2R | 15763350..15763591 | 2281..2040 | 1210 | 100 | Minus |
| 2R | 25286936 | 2R | 15773039..15773255 | 1729..1513 | 1085 | 100 | Minus |
| 2R | 25286936 | 2R | 15778352..15778546 | 1254..1060 | 975 | 100 | Minus |
| 2R | 25286936 | 2R | 15763645..15763832 | 2042..1855 | 940 | 100 | Minus |
| 2R | 25286936 | 2R | 15783088..15783245 | 436..279 | 790 | 100 | Minus |
| 2R | 25286936 | 2R | 15773814..15773967 | 1516..1363 | 770 | 100 | Minus |
| 2R | 25286936 | 2R | 15783315..15783468 | 279..126 | 770 | 100 | Minus |
| 2R | 25286936 | 2R | 15781773..15781906 | 570..437 | 670 | 100 | Minus |
| 2R | 25286936 | 2R | 15765123..15765254 | 1857..1726 | 660 | 100 | Minus |
| 2R | 25286936 | 2R | 15803359..15803471 | 129..17 | 565 | 100 | Minus |
| 2R | 25286936 | 2R | 15777176..15777286 | 1365..1255 | 555 | 100 | Minus |
| 2R | 25286936 | 2R | 15780985..15781080 | 665..570 | 480 | 100 | Minus |
| 2R | 25286936 | 2R | 15763196..15763271 | 2356..2281 | 380 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:11:24 has no hits.
BO20859.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-10-20 10:47:49 Download gff for
BO20859.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zasp-RE | 202..2541 | 17..2358 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:29:42 Download gff for
BO20859.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zasp52-RE | 206..2545 | 17..2358 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:08:10 Download gff for
BO20859.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zasp52-RE | 206..2545 | 17..2358 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:08:10 Download gff for
BO20859.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15763194..15763270 | 2282..2358 | 97 | <- | Minus |
| 2R | 15803361..15803471 | 17..127 | 100 | | Minus |
| 2R | 15763350..15763589 | 2042..2281 | 100 | <- | Minus |
| 2R | 15763646..15763829 | 1858..2041 | 100 | <- | Minus |
| 2R | 15765123..15765252 | 1728..1857 | 100 | <- | Minus |
| 2R | 15773041..15773253 | 1515..1727 | 100 | <- | Minus |
| 2R | 15773816..15773966 | 1364..1514 | 100 | <- | Minus |
| 2R | 15777178..15777286 | 1255..1363 | 100 | <- | Minus |
| 2R | 15778352..15778546 | 1060..1254 | 100 | <- | Minus |
| 2R | 15779265..15779658 | 666..1059 | 100 | <- | Minus |
| 2R | 15780985..15781079 | 571..665 | 100 | <- | Minus |
| 2R | 15781773..15781906 | 437..570 | 100 | <- | Minus |
| 2R | 15783088..15783244 | 280..436 | 100 | <- | Minus |
| 2R | 15783315..15783466 | 128..279 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:29:42 Download gff for
BO20859.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11669278..11669411 | 437..570 | 100 | <- | Minus |
| arm_2R | 11670593..11670749 | 280..436 | 100 | <- | Minus |
| arm_2R | 11670820..11670971 | 128..279 | 100 | <- | Minus |
| arm_2R | 11690866..11690976 | 17..127 | 100 | | Minus |
| arm_2R | 11650699..11650775 | 2282..2358 | 97 | <- | Minus |
| arm_2R | 11650855..11651094 | 2042..2281 | 100 | <- | Minus |
| arm_2R | 11651151..11651334 | 1858..2041 | 100 | <- | Minus |
| arm_2R | 11652628..11652757 | 1728..1857 | 100 | <- | Minus |
| arm_2R | 11660546..11660758 | 1515..1727 | 100 | <- | Minus |
| arm_2R | 11661321..11661471 | 1364..1514 | 100 | <- | Minus |
| arm_2R | 11664683..11664791 | 1255..1363 | 100 | <- | Minus |
| arm_2R | 11665857..11666051 | 1060..1254 | 100 | <- | Minus |
| arm_2R | 11666770..11667163 | 666..1059 | 100 | <- | Minus |
| arm_2R | 11668490..11668584 | 571..665 | 100 | <- | Minus |
BO20859.pep Sequence
Translation from 16 to 2374
> BO20859.pep
MAQPQLLQIKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQ
PGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPT
GNVPQPNSPYLQTVTKTSLAHKQQDSQHIGCGYNNAARPFSNGGDGGVKS
IVNKQYNTPVGIYSDESIAETLSAQAEVLAGGVLGVNFKKNEKEYQGDRS
EVLKFLREEETGQSTPEPHSPANFYWTQSHAIGGNERRTPLHHQHQQPQQ
DERIGVPLQSNTLAPEATHRPSLPVAPKDNEEQARQDQQEQPDPRIIVLP
ICPGLQGPEYKAEMEAAAAALATDQDGRPRPLAASGHPACQLCGVGIVGV
FVRIKDKNLHVECFKCATCGTSLKNQGYYNFNNKLYCDIHAKQAAINNPP
TGTEGYVPVPIKPNTKLSASTISSALNSHGYGGHSNGYSNGNSTPAPAPV
NQGYARPFGAAAPKSPVSYPPQQQQQSPRPAPGGQNPYATLPRSNVGQQG
RNVRYQQQQQQQQQYNNQQKQQYRNSYPMGSNYSTPSQSPYITSNTNNYS
SSNSYNNNNYSNYNNNNVYRGAGGKSAGAFGATSAPKRGRGILNKAAGPG
VRIPLCNSCNVQIRGPFITALGRIWCPDHFICVNGNCRRPLQDIGFVEEK
GDLYCEYCFEKYLAPTCSKCAGKIKGDCLNAIGKHFHPECFTCGQCGKIF
GNRPFFLEDGNAYCEADWNELFTTKCFACGFPVEAGDRWVEALNHNYHSQ
CFNCTFCKQNLEGQSFYNKGGRPFCKNHARASFLDH
BO20859.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:39:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zasp52-PE | 780 | CG30084-PE | 1..780 | 1..780 | 4271 | 100 | Plus |
| Zasp52-PG | 890 | CG30084-PG | 1..890 | 1..780 | 3623 | 79.4 | Plus |
| Zasp52-PR | 722 | CG30084-PR | 1..722 | 1..780 | 3538 | 85.5 | Plus |
| Zasp52-PS | 787 | CG30084-PS | 1..787 | 1..780 | 3309 | 76.7 | Plus |
| Zasp52-PU | 716 | CG30084-PU | 1..716 | 1..780 | 3101 | 76.5 | Plus |
