BO20868.complete Sequence
583 bp assembled on 2009-05-13
GenBank Submission: KX799918
> BO20868.complete
GAAGTTATCAGTCGACATGAAAAACGAGATTCGACTGATATGTTGGTATA
TAAACCAGAGGATTGAGCTTTCTTCGTTTAGATCACAAAATCTCCCCAAA
ACGAAAATGAAACTTCTTCTGGTTCTGGCATTGGCAGTCTTCGTAGCCCA
CGTGGCTGTGGCCCAGACAACTGATTCGTCTGACGATGGAGATTACTCTT
ACGATTACGCTGATGACAACGATACTGCCGGTAGCTCCGAAGACAACACT
GCTGATTCTGGAGACACTAGTGATAGCTCCACTGACGTCGACAGTGGAAA
CGACTCTGGGGACGTCGATTCCTATGACGACTACGAGGGCTCTAGCGATG
TTACGGAAGCACCAACTGCTGCTCCAGTTGTCAAAAAGAACAAAAGAGCT
GGTGCCAGGAAAAACAACAGGAACAACAAGAATAAGGCAGCAGCTAAACG
TCGCAATGCCGCCGCTGCCAAGAAAAGTAATAACAAGAAGGCGGCTAAGA
AGCGAACACCTGTTGCCGCCAAGAAGCGGGCAAATGCTGGACCCAACAAA
CGTAGGCGCTCTGGAGCAAGCTTTCTAGACCAT
BO20868.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:01:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17362-RB | 462 | CG17362-PB | 1..459 | 107..565 | 2295 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:02:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17362-RB | 565 | CG17362-RB | 1..494 | 72..565 | 2470 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:01:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 13986564..13987113 | 16..565 | 2750 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 15:01:58 has no hits.
BO20868.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:38:23 Download gff for
BO20868.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17362-RA | 620..1168 | 17..567 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:36:17 Download gff for
BO20868.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17362-RB | 1..494 | 72..567 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:58:19 Download gff for
BO20868.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17362-RB | 1..494 | 72..567 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:58:19 Download gff for
BO20868.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 13986565..13987113 | 17..567 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:36:17 Download gff for
BO20868.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 13979665..13980213 | 17..567 | 99 | | Plus |
BO20868.pep Sequence
Translation from 16 to 583
> BO20868.pep
MKNEIRLICWYINQRIELSSFRSQNLPKTKMKLLLVLALAVFVAHVAVAQ
TTDSSDDGDYSYDYADDNDTAGSSEDNTADSGDTSDSSTDVDSGNDSGDV
DSYDDYEGSSDVTEAPTAAPVVKKNKRAGARKNNRNNKNKAAAKRRNAAA
AKKSNNKKAAKKRTPVAAKKRANAGPNKRRRSGASFLDH
BO20868.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:56:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17362-PB | 153 | CG17362-PB | 1..153 | 31..183 | 772 | 100 | Plus |
CG9040-PA | 161 | CG9040-PA | 1..161 | 31..183 | 253 | 42.9 | Plus |
Pig1-PB | 172 | CG10790-PB | 4..168 | 29..184 | 190 | 35.1 | Plus |