Clone BO20884 Report

Search the DGRC for BO20884

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:208
Well:84
Vector:pDNR-Dual
Associated Gene/TranscriptCG15927-RA
Protein status:BO20884.pep: Imported from assembly
Sequenced Size:601

Clone Sequence Records

BO20884.complete Sequence

601 bp assembled on 2009-05-13

GenBank Submission: KX794561

> BO20884.complete
GAAGTTATCAGTCGACATGCACATTTTGGCCTATTTAATTCTGAGCCTTT
TTGGCCTGGTCGAGAGTTATGGCCATCAGCCGGTACTGAGAAATATCATC
AAAGTGCGAGCCAGCGGCTTTATGCCCTTCGAATCGGATTTACTACTGCC
ATTGAATATCCTGCGCCAGTTGCAGTCGCACGATCGATCATCGCGTTACA
TTGGTCAGAGGCCAAAGCCAATAGTGAGGCCAAAGGTTAAGCAACAAATC
AGATTGGAGAGAGCCAATCCTTTGAGGGAGGCCAAAGGTGTTCAGCTCTA
TAACTTGATCGATGACGATGGTGAACTACTGTTGAATCTCAAGGTTCACA
ACGAACAGAAGGGAACTGCACCGGCCAATTATCAAGAGGAGAAATATCAA
AGTAGATACCAGAGCTACGATTCACCATGGATGCCCTCGAAATGGAGACC
GACCAGCGAATTTCTGGGTGTGACCTCCTCATCGCCACGCCCACTGCCCC
TGCATCAGTATCTGGGCCAAAACAATAATCGCATCGATCAAAATACGGCG
AAAAGGAGGCGGCAGGATATATGGCCCCACAAAGCAAGCTTTCTAGACCA
T

BO20884.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:40:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG15927-RB 570 CG15927-PB 1..567 17..583 2835 100 Plus
CG15927-RA 570 CG15927-PA 1..567 17..583 2835 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:40:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG15927-RB 715 CG15927-RB 141..707 17..583 2835 100 Plus
CG15927-RA 955 CG15927-RA 141..707 17..583 2835 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:40:00
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 12454869..12455435 17..583 2835 100 Plus
Blast to na_te.dros performed on 2014-11-27 14:40:01 has no hits.

BO20884.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:38:51 Download gff for BO20884.complete
Subject Subject Range Query Range Percent Splice Strand
CG15927-RA 1..567 17..585 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:48:57 Download gff for BO20884.complete
Subject Subject Range Query Range Percent Splice Strand
CG15927-RA 131..697 17..585 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:16:21 Download gff for BO20884.complete
Subject Subject Range Query Range Percent Splice Strand
CG15927-RA 141..707 17..585 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:16:21 Download gff for BO20884.complete
Subject Subject Range Query Range Percent Splice Strand
X 12454869..12455435 17..585 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:48:57 Download gff for BO20884.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 12348902..12349468 17..585 99   Plus

BO20884.pep Sequence

Translation from 16 to 601

> BO20884.pep
MHILAYLILSLFGLVESYGHQPVLRNIIKVRASGFMPFESDLLLPLNILR
QLQSHDRSSRYIGQRPKPIVRPKVKQQIRLERANPLREAKGVQLYNLIDD
DGELLLNLKVHNEQKGTAPANYQEEKYQSRYQSYDSPWMPSKWRPTSEFL
GVTSSSPRPLPLHQYLGQNNNRIDQNTAKRRRQDIWPHKASFLDH

BO20884.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:16:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG15927-PB 189 CG15927-PB 1..189 1..189 996 100 Plus
CG15927-PA 189 CG15927-PA 1..189 1..189 996 100 Plus