BO20885.complete Sequence
994 bp assembled on 2009-05-13
GenBank Submission: KX797945
> BO20885.complete
GAAGTTATCAGTCGACATGTTGCCGAAATTAAAAACCGGTGGAGGGTTCT
TCTCCTATTTTAAGACTGAAAAGGGCCGAAAACTCGTATTCTACGCGGCG
GGAGCCACCACAGTGGGCCTCTTTCTTGGAAACTTCCTGCCGCACACATT
CGGCCTGAAATATTACCGCGATTTCGTGCAATGCTACCAACACGGCGTGG
GGCGTCCAGTGCCGGAGGCAGTGCAGCAGCGCCTGGAAAAGGCATTGGAT
CAGCTGGGCGTGACGCCCTTTGAGCGAAAGTTTGTGAAGCCCTTCACCGT
CTTTGGATTCGATGTTTTCCAGGCGGGCACCACTAAGTTTCGATTTGGAG
GCGCTTTGGGCATACCGGTGAACTATGGATACGACAGTCTGGAGGAGATT
AAGCGGGCAGACATTCGGTTTAGAGACAAACAGATCAACTGGAGTTCTCC
CAGCGGAAAACTGCTAGAGGAAGCCATCGTTTTGAATGAGGATGAACAGA
TTTTCGGTCTTAGCAAGGCTGTTCTGCAGATGCAAACCCATCGGGTACTG
CTCAACTCCATCTTTCCCAGCGTCAGCTTTCTTATGGTTTACACCATGGG
TCACTACCTCAACCTGCGGCTAGATCTCTTCGCCCGCCATGGAAGCGTGC
GGTTTGTGCTCTACAGCATTCTGGGTCTGTTTGGCTTAGGGCTCTGGTCC
TTCATGAAAGACTACAATCAGGTCTCTACGGACGCAGAGATTGACCAGCG
ACTGGCCACGATGGGTCCCCAACTTGTGGCAGCTGGAGCTAGCTTTTACG
ACAAACATCTAAAGAAGAACATCGCGCTGAGGGAGCTGATTGGAAATGAC
GTTTACACTGCACTGGGCAACGAAAACTATATGATTCGGCAAAAGTCCAT
GCCGCTAACAGCACGAAAATCTTTCTTCCTGGAGAAGCTGGAGGAACTCA
AAAAGGCGCAACAGCCTGAAACAGAGGCAAGCTTTCTAGACCAT
BO20885.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:07:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33506-RA | 963 | CG33506-PA | 1..960 | 17..976 | 4800 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:07:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33506-RA | 1073 | CG33506-RA | 45..1004 | 17..976 | 4800 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:07:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14857905..14858364 | 649..190 | 2300 | 100 | Minus |
| 2R | 25286936 | 2R | 14857516..14857845 | 976..647 | 1650 | 100 | Minus |
| 2R | 25286936 | 2R | 14858424..14858596 | 189..17 | 865 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:07:32 has no hits.
BO20885.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:38:50 Download gff for
BO20885.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33506-RA | 16..970 | 22..978 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:52:53 Download gff for
BO20885.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33506-RA | 50..1004 | 22..978 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:11:46 Download gff for
BO20885.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33506-RA | 50..1004 | 22..978 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:11:46 Download gff for
BO20885.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14857514..14857845 | 647..978 | 99 | <- | Minus |
| 2R | 14857908..14858364 | 190..646 | 100 | <- | Minus |
| 2R | 14858424..14858591 | 22..189 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:52:53 Download gff for
BO20885.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10745019..10745350 | 647..978 | 99 | <- | Minus |
| arm_2R | 10745413..10745869 | 190..646 | 100 | <- | Minus |
| arm_2R | 10745929..10746096 | 22..189 | 100 | | Minus |
BO20885.pep Sequence
Translation from 16 to 994
> BO20885.pep
MLPKLKTGGGFFSYFKTEKGRKLVFYAAGATTVGLFLGNFLPHTFGLKYY
RDFVQCYQHGVGRPVPEAVQQRLEKALDQLGVTPFERKFVKPFTVFGFDV
FQAGTTKFRFGGALGIPVNYGYDSLEEIKRADIRFRDKQINWSSPSGKLL
EEAIVLNEDEQIFGLSKAVLQMQTHRVLLNSIFPSVSFLMVYTMGHYLNL
RLDLFARHGSVRFVLYSILGLFGLGLWSFMKDYNQVSTDAEIDQRLATMG
PQLVAAGASFYDKHLKKNIALRELIGNDVYTALGNENYMIRQKSMPLTAR
KSFFLEKLEELKKAQQPETEASFLDH
BO20885.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:16:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33506-PA | 320 | CG33506-PA | 1..320 | 1..320 | 1657 | 100 | Plus |
