BO20896.complete Sequence
469 bp assembled on 2009-05-13
> BO20896.complete
GAAGTTATCAGTCGACATGCGAGTTAGTTTCGTTTCAAGCGTCACTGAGA
TCACAAAAGCCAACATGAAGTTCGCCGTTGTCGTAGTCCTGTTCGCTTTG
GCCTGGGGTGTCAACAGCTCGGTGGTGCCTCTCCTGACCTCCGCCCATGG
TCTGGTGGTCGGTTCTCCCGCCGTCGCCGGTTCGGTGGCCATCCAGGCAT
CTGCGGTTCCCGCTGCCGTTCCCCTGTCCCTGTCCCCAGCCGGACCCGTG
CTCATCCAGTCTGGACCAGCGGTGGTTGCCGCTCCCGTTCCCGCCGCTGT
GGTTGCTGCCCACGCCCCCGCCGTGGTGGCCGTCGCCGCTCCGGAGGCCA
GCTATGTGGCCAAGACCCGTGGAGCTGTCCATGTGGCTCCTCTGCCAGGA
CATGTGCAGTCCGCTGCTTCCGTGAACTTGGAACCCGCACCAGGCACCTG
GGCAAGCTTTCTAGACCAT
BO20896.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:46:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7203-RC | 390 | CG7203-PC | 1..387 | 65..451 | 1935 | 100 | Plus |
CG7203-RB | 390 | CG7203-PB | 1..387 | 65..451 | 1935 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:46:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7203-RC | 730 | CG7203-RC | 37..466 | 22..451 | 2150 | 100 | Plus |
CG7203-RB | 697 | CG7203-RB | 4..433 | 22..451 | 2150 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:46:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 7752434..7752816 | 451..69 | 1915 | 100 | Minus |
2L | 23513712 | 2L | 7753102..7753150 | 70..22 | 245 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 15:46:32 has no hits.
BO20896.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:38:45 Download gff for
BO20896.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7203-RB | 2..436 | 17..453 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:46:06 Download gff for
BO20896.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7203-RB | 1..433 | 21..453 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:16:16 Download gff for
BO20896.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7203-RB | 1..433 | 21..453 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:16:16 Download gff for
BO20896.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 7752432..7752814 | 71..453 | 99 | <- | Minus |
2L | 7753102..7753155 | 17..70 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:46:06 Download gff for
BO20896.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 7752432..7752814 | 71..453 | 99 | <- | Minus |
arm_2L | 7753102..7753155 | 17..70 | 96 | | Minus |
BO20896.pep Sequence
Translation from 16 to 469
> BO20896.pep
MRVSFVSSVTEITKANMKFAVVVVLFALAWGVNSSVVPLLTSAHGLVVGS
PAVAGSVAIQASAVPAAVPLSLSPAGPVLIQSGPAVVAAPVPAAVVAAHA
PAVVAVAAPEASYVAKTRGAVHVAPLPGHVQSAASVNLEPAPGTWASFLD
H
BO20896.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:57:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7203-PC | 129 | CG7203-PC | 1..129 | 17..145 | 632 | 100 | Plus |
CG7203-PB | 129 | CG7203-PB | 1..129 | 17..145 | 632 | 100 | Plus |
Acp1-PA | 135 | CG7216-PA | 1..134 | 17..144 | 276 | 52.9 | Plus |
CG31904-PB | 403 | CG31904-PB | 221..341 | 16..130 | 214 | 48.8 | Plus |
CG31904-PD | 403 | CG31904-PD | 221..341 | 16..130 | 214 | 48.8 | Plus |