BO20906.complete Sequence
736 bp assembled on 2009-05-13
GenBank Submission: KX796152
> BO20906.complete
GAAGTTATCAGTCGACATGAAACTCTACGCCGTATCCGATGGTCCGCCTT
CCCTGGCCGTTCGCATGACCCTGAAGGCCTTGGATATACAATATCAACTC
ATCAATGTGGACTTTTGCGCCATGGAACATCGCTCTGAGGAGTACTCGAA
GATGAATCCGCAAAAGGAGATACCCGTGCTGGACGACGACGGTTTCTATC
TATCGGAGAGCATTGCCATTATGCAATACCTCTGCGACAAGTACGCGCCG
GATTCAACGCTATATCCGCAGGACGTCAATGTGAGAGCAGTAATCAATCA
GCGGCTATGCTTTAACATGGGATTCTACTATGCCCCCATATCCGCCCACA
GCATGGCGCCCATTTTCTTCGACTACAAACGTACGCCCATGTCGCTAAAG
AAGGTGCAGAACGCACTTGATGTGTTCGAAACCTATTTGCAGCGACTGGG
CACTAAGTACGCGGCAGGCGAGAACATAACCATTGCAGACTTCGCTCTCA
TTTCGGCCACGATCTGCTTGGAGGCAATTAACTTTGACTTGCACCAGTTT
ACGTTGGTGAACAAGTGGTACGAAACCTTCAAGGTGGAATACCCGCAGCT
GTGGGAGATCGCCAACAGCGGCATGCAGGAGATAAGTGCGTTTGAGCAGA
ACCCACCGGATATGTCACACATGGAACACCCATTCCATCCGACGCGCAAG
TCTATGGGCCTGAAGTTGGCAAGCTTTCTAGACCAT
BO20906.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:30:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
gfzf-RE | 3138 | CG33546-PE | 2434..3135 | 17..718 | 3510 | 100 | Plus |
gfzf-RD | 705 | CG33546-PD | 1..702 | 17..718 | 3510 | 100 | Plus |
gfzf-RB | 3138 | CG33546-PB | 2434..3135 | 17..718 | 3510 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:30:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
gfzf-RE | 3608 | CG33546-RE | 2772..3473 | 17..718 | 3510 | 100 | Plus |
gfzf-RD | 1200 | CG33546-RD | 62..763 | 17..718 | 3510 | 100 | Plus |
gfzf-RB | 3910 | CG33546-RB | 2772..3473 | 17..718 | 3510 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:30:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 7146317..7146885 | 718..150 | 2845 | 100 | Minus |
3R | 32079331 | 3R | 7146945..7147079 | 151..17 | 675 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:30:44 has no hits.
BO20906.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:37:06 Download gff for
BO20906.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
gfzf-RD | 59..760 | 17..720 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:11:12 Download gff for
BO20906.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
gfzf-RB | 2772..3473 | 17..720 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:20:44 Download gff for
BO20906.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
gfzf-RB | 2772..3473 | 17..720 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:20:44 Download gff for
BO20906.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7146315..7146883 | 152..720 | 99 | <- | Minus |
3R | 7146945..7147079 | 17..151 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:11:12 Download gff for
BO20906.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 2972037..2972605 | 152..720 | 99 | <- | Minus |
arm_3R | 2972667..2972801 | 17..151 | 100 | | Minus |
BO20906.pep Sequence
Translation from 16 to 736
> BO20906.pep
MKLYAVSDGPPSLAVRMTLKALDIQYQLINVDFCAMEHRSEEYSKMNPQK
EIPVLDDDGFYLSESIAIMQYLCDKYAPDSTLYPQDVNVRAVINQRLCFN
MGFYYAPISAHSMAPIFFDYKRTPMSLKKVQNALDVFETYLQRLGTKYAA
GENITIADFALISATICLEAINFDLHQFTLVNKWYETFKVEYPQLWEIAN
SGMQEISAFEQNPPDMSHMEHPFHPTRKSMGLKLASFLDH
BO20906.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:16:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
gfzf-PD | 234 | CG33546-PD | 1..234 | 1..234 | 1236 | 100 | Plus |
gfzf-PE | 1045 | CG33546-PE | 812..1045 | 1..234 | 1236 | 100 | Plus |
gfzf-PB | 1045 | CG33546-PB | 812..1045 | 1..234 | 1236 | 100 | Plus |
GstD1-PB | 209 | CG10045-PB | 5..207 | 4..209 | 329 | 36.4 | Plus |
GstD1-PA | 209 | CG10045-PA | 5..207 | 4..209 | 329 | 36.4 | Plus |