BO20909.complete Sequence
646 bp assembled on 2009-05-13
GenBank Submission: KX796165
> BO20909.complete
GAAGTTATCAGTCGACATGAATAATATTGAAGAGGACACCGAAGCAGCCT
TCAAACGGCTCCAGGCTGTCATTCCACAGGTGAAGCAGGCCTACGAGGAA
GCCATTGGACAGATCTTCTCGGATTTAAACTCCTCAGATCTTGAGTCGTG
TGCCTCCATCCTCGAGGAGCACGAATCCACGAGCCTGGACACCGAGCAAA
TAATCCACAGCACCCGTCGGCTTATGACCAAGATCGTCCTGGATGTGAAC
CAGTGCTTCTTCTCCGGCAACGACGTGGAGACCAAGCTGACCACGCTGGA
AATGCTTAAGGAGCAGTTTGCCGCCCACGAGGGCAAGAACTGGAACTTCA
ACTGTCTGTCCCCTGAGGAACTTACTCGCCCTCTGCGCATGCACAACTTG
AATCTAAGCATCACATTCATGGAGCAACAGCTTAAGAAACAGGAAAAGGA
ACTCGAGATTGCTATGGCCAAAAGCATTAAAAATCGACAGCTTATACATG
ATGTCCACGCTGAACGGGTGAAAGTGGGATGTATGATGAAGCAGCAGTTG
GCCGAGTACCAGGCCATTAAGCCACAGTTAATGGAAATGGAACGGCTAAT
AAATGATTCGTATGTGCAGGAAGAAATGGCAAGCTTTCTAGACCAT
BO20909.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:49:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Nnf1b-RA | 615 | CG31658-PA | 1..612 | 17..628 | 3060 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:49:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Nnf1b-RA | 783 | CG31658-RA | 70..681 | 17..628 | 3060 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:49:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 810809..811022 | 130..343 | 1070 | 100 | Plus |
2L | 23513712 | 2L | 811257..811429 | 456..628 | 865 | 100 | Plus |
2L | 23513712 | 2L | 811088..811203 | 342..457 | 580 | 100 | Plus |
2L | 23513712 | 2L | 810646..810758 | 17..129 | 565 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 12:49:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
G-element | 4346 | G-element DMREPG 4346bp Derived from X06950 (g8427) (Rel. 16, Last updated, Version 1). | 3235..3311 | 24..103 | 113 | 65.4 | Plus |
BO20909.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 18:39:34 Download gff for
BO20909.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Nnf1b-RA | 1..612 | 17..630 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:37:53 Download gff for
BO20909.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Nnf1b-RA | 70..681 | 17..630 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:05:32 Download gff for
BO20909.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Nnf1b-RA | 70..681 | 17..630 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:05:32 Download gff for
BO20909.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 810646..810758 | 17..129 | 100 | -> | Plus |
2L | 810809..811021 | 130..342 | 100 | -> | Plus |
2L | 811089..811203 | 343..457 | 100 | -> | Plus |
2L | 811259..811429 | 458..630 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:37:53 Download gff for
BO20909.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 810646..810758 | 17..129 | 100 | -> | Plus |
arm_2L | 810809..811021 | 130..342 | 100 | -> | Plus |
arm_2L | 811089..811203 | 343..457 | 100 | -> | Plus |
arm_2L | 811259..811429 | 458..630 | 98 | | Plus |
BO20909.pep Sequence
Translation from 16 to 646
> BO20909.pep
MNNIEEDTEAAFKRLQAVIPQVKQAYEEAIGQIFSDLNSSDLESCASILE
EHESTSLDTEQIIHSTRRLMTKIVLDVNQCFFSGNDVETKLTTLEMLKEQ
FAAHEGKNWNFNCLSPEELTRPLRMHNLNLSITFMEQQLKKQEKELEIAM
AKSIKNRQLIHDVHAERVKVGCMMKQQLAEYQAIKPQLMEMERLINDSYV
QEEMASFLDH
BO20909.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:16:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Nnf1b-PA | 204 | CG31658-PA | 1..204 | 1..204 | 1035 | 100 | Plus |
Nnf1a-PA | 194 | CG13434-PA | 2..193 | 6..197 | 574 | 57.3 | Plus |