BO21130.complete Sequence
1129 bp assembled on 2011-03-18
> BO21130.complete
GAAGTTATCAGTCGACATGTCCTTCGCGGCTATGGCGAATACCAACACAG
AAAAACTTTACATGCAACTAAGCGCATCGGAATTATCAGCAATTATTATG
AAAGATTCACCCAATTCCAACGACCGTGATGCGGGTTTTTGTTCCGCCAG
TTCGGAAAGCGAAGGCGGAGACGACTTGGTCGTCGAGCACGCGCGCAGTG
GCAGTCCCGACATCAGACCAAAAGGAACAGACTCGGCGGACTCCAAGCCA
ATAGCCCTTGTCCGCAACAAACGCAAGAGTTCGGAACCCTTCAAAGTCGT
AGGTTTGACGACTCCCAACTCTAAATCCATGCCTGGTCCTCCGTCCAGTG
CGAGTATGAATGCAACTGGTCCGCTAAAGAAACGCATACGATACACATCT
TCCGCCGATTCGGCAGTTGTCCTAACGCCACCAGCCATAGACTCTCCACC
GCCCAACAGTTGCATACCTTCCACGTTGCGCCTGCAGCATGAAATAATGC
CTAATCCGGCACATATATATGTTCGCCATCCGGGAGTTACGACTCTTCAC
AGATCGCTTGCTGCCCACCCAGAACAGCTGGAACCACTCGCATTAGTAAC
GACCAAAAAGCAATGTGTCGACCAAGCGGGGCCTAAAATAGAGGCCTTTT
CCGCATTGCTAATTGGAAAACAGCCATCCGCCAAAAAAACGTTGAAGGAA
AGGACGCAAAAAGAATCAACGTCATCTTCCTTTTTAGAAGCTAGTCTTAG
CGATGAGGATCTGAACAAGACGGGATTGGCACCAATTTCGCGACCTCATC
AACATCAACGCAATTACAAGAATATGACTAGGGAGCGCCGCATTGAGGCG
AACGCACGTGAACGGACCCGTGTACACACCATATCCGCCGCCTACGAAAC
GCTCCGCCAAGCTGTTCCAGCCTATGCCAGCACTCAAAAACTTTCCAAAC
TCTCCGTTCTTCGGGTAGCGTGTTCCTATATACTAACCTTAAGTAGAATG
GCTGGCGAGGATTACAGCGCCGATCAATCCGTACCGTCCATTGCCACGTG
CTTAGAAGCTGTAACATCAACCATCCAAACGGAGGGAAAAGTGAAACGAA
AGAAAGACGAGGCAAGCTTTCTAGACCAT
BO21130.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:31:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
net-RC | 1083 | CG11450-PC | 1..1080 | 32..1111 | 5400 | 100 | Plus |
net-RB | 1083 | CG11450-PB | 1..1080 | 32..1111 | 5400 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:31:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
net-RC | 1662 | CG11450-RC | 281..1375 | 17..1111 | 5475 | 100 | Plus |
net-RB | 2225 | CG11450-RB | 281..1375 | 17..1111 | 5475 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:31:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 83271..84279 | 1111..103 | 5045 | 100 | Minus |
2L | 23513712 | 2L | 87020..87107 | 104..17 | 440 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:31:39 has no hits.
BO21130.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-18 10:00:35 Download gff for
BO21130.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
net-RB | 276..1370 | 17..1113 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:36:28 Download gff for
BO21130.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
net-RB | 281..1375 | 17..1113 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:54:47 Download gff for
BO21130.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
net-RB | 281..1375 | 17..1113 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:54:47 Download gff for
BO21130.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 83269..84277 | 105..1113 | 99 | <- | Minus |
2L | 87020..87107 | 17..104 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:36:28 Download gff for
BO21130.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 83269..84277 | 105..1113 | 99 | <- | Minus |
arm_2L | 87020..87107 | 17..104 | 100 | | Minus |
BO21130.pep Sequence
Translation from 16 to 1129
> BO21130.pep
MSFAAMANTNTEKLYMQLSASELSAIIMKDSPNSNDRDAGFCSASSESEG
GDDLVVEHARSGSPDIRPKGTDSADSKPIALVRNKRKSSEPFKVVGLTTP
NSKSMPGPPSSASMNATGPLKKRIRYTSSADSAVVLTPPAIDSPPPNSCI
PSTLRLQHEIMPNPAHIYVRHPGVTTLHRSLAAHPEQLEPLALVTTKKQC
VDQAGPKIEAFSALLIGKQPSAKKTLKERTQKESTSSSFLEASLSDEDLN
KTGLAPISRPHQHQRNYKNMTRERRIEANARERTRVHTISAAYETLRQAV
PAYASTQKLSKLSVLRVACSYILTLSRMAGEDYSADQSVPSIATCLEAVT
STIQTEGKVKRKKDEASFLDH
BO21130.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:06:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
net-PC | 360 | CG11450-PC | 1..360 | 6..365 | 1819 | 100 | Plus |
net-PB | 360 | CG11450-PB | 1..360 | 6..365 | 1819 | 100 | Plus |