BO21305.complete Sequence
517 bp assembled on 2009-07-17
GenBank Submission: KX798634
> BO21305.complete
GAAGTTATCAGTCGACATGAGTATGAGCGACGACGACCGCGACATAGACA
TCGAAAGTGACGAGGACGGGGACTCGGACACTGGCTTGGGATCCTCGCGA
CACACAAACACCGCCAATTTCACCCAGGCCGAAAAGCGGGCGCACCACAA
CGCTTTGGAGCGAAGGCGGCGCGATCACATCAAGGAGAGCTTCACCAACC
TGCGTGAGGCGGTGCCCACACTCAAGGGCGAAAAGGCGAGTCGAGCTCAA
ATCCTGAAAAAGACCACCGAATGCATACAGACGATGAGGCGGAAGATCAG
TGAAAACCAGAAAGACATCGAAGAGATCAAGAGGCAAAACAACATAATAG
CTAAGCAGATACAAGCACTGGAGAGTTCAAATGGGGATCAGTTCAGCGAA
TTTCTCAGCGACGAGGAAGTGGGCAGCGAGGAGGCCGACGACGAAGACCT
CGACCAGGACTTCAGTAGACGCAATAAAAAGATGAAGACCTTCCACGCAG
CAAGCTTTCTAGACCAT
BO21305.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:17:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Max-RD | 486 | CG9648-PD | 1..483 | 17..499 | 2415 | 100 | Plus |
Max-RC | 486 | CG9648-PC | 1..483 | 17..499 | 2415 | 100 | Plus |
Max-RA | 486 | CG9648-PA | 1..483 | 17..499 | 2415 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:17:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Max-RD | 1289 | CG9648-RD | 158..642 | 15..499 | 2425 | 100 | Plus |
Max-RC | 822 | CG9648-RC | 158..642 | 15..499 | 2425 | 100 | Plus |
Max-RA | 995 | CG9648-RA | 158..642 | 15..499 | 2425 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:17:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 19262879..19263018 | 499..360 | 700 | 100 | Minus |
3L | 28110227 | 3L | 19263084..19263209 | 359..234 | 630 | 100 | Minus |
3L | 28110227 | 3L | 19263416..19263526 | 236..126 | 555 | 100 | Minus |
3L | 28110227 | 3L | 19263839..19263905 | 128..62 | 335 | 100 | Minus |
3L | 28110227 | 3L | 19263980..19264027 | 62..15 | 240 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 20:17:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
gypsy4 | 6852 | gypsy4 GYPSY4 6852bp | 508..608 | 271..368 | 119 | 60.4 | Plus |
BO21305.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-07-27 12:13:29 Download gff for
BO21305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Max-RA | 167..649 | 17..501 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:06:05 Download gff for
BO21305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Max-RA | 160..642 | 17..501 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:18:36 Download gff for
BO21305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Max-RA | 160..642 | 17..501 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:18:36 Download gff for
BO21305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19262875..19263018 | 360..501 | 98 | <- | Minus |
3L | 19263084..19263207 | 236..359 | 100 | <- | Minus |
3L | 19263417..19263524 | 128..235 | 100 | <- | Minus |
3L | 19263840..19263905 | 62..127 | 100 | <- | Minus |
3L | 19263981..19264025 | 17..61 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:06:05 Download gff for
BO21305.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 19256940..19257005 | 62..127 | 100 | <- | Minus |
arm_3L | 19257081..19257125 | 17..61 | 100 | | Minus |
arm_3L | 19255975..19256118 | 360..501 | 98 | <- | Minus |
arm_3L | 19256184..19256307 | 236..359 | 100 | <- | Minus |
arm_3L | 19256517..19256624 | 128..235 | 100 | <- | Minus |
BO21305.pep Sequence
Translation from 16 to 517
> BO21305.pep
MSMSDDDRDIDIESDEDGDSDTGLGSSRHTNTANFTQAEKRAHHNALERR
RRDHIKESFTNLREAVPTLKGEKASRAQILKKTTECIQTMRRKISENQKD
IEEIKRQNNIIAKQIQALESSNGDQFSEFLSDEEVGSEEADDEDLDQDFS
RRNKKMKTFHAASFLDH
BO21305.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:52:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Max-PD | 161 | CG9648-PD | 1..161 | 1..161 | 818 | 100 | Plus |
Max-PC | 161 | CG9648-PC | 1..161 | 1..161 | 818 | 100 | Plus |
Max-PA | 161 | CG9648-PA | 1..161 | 1..161 | 818 | 100 | Plus |