Clone BO21305 Report

Search the DGRC for BO21305

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:213
Well:5
Vector:pDNR-Dual
Associated Gene/TranscriptMax-RA
Protein status:BO21305.pep: full length peptide match
Sequenced Size:517

Clone Sequence Records

BO21305.complete Sequence

517 bp assembled on 2009-07-17

GenBank Submission: KX798634

> BO21305.complete
GAAGTTATCAGTCGACATGAGTATGAGCGACGACGACCGCGACATAGACA
TCGAAAGTGACGAGGACGGGGACTCGGACACTGGCTTGGGATCCTCGCGA
CACACAAACACCGCCAATTTCACCCAGGCCGAAAAGCGGGCGCACCACAA
CGCTTTGGAGCGAAGGCGGCGCGATCACATCAAGGAGAGCTTCACCAACC
TGCGTGAGGCGGTGCCCACACTCAAGGGCGAAAAGGCGAGTCGAGCTCAA
ATCCTGAAAAAGACCACCGAATGCATACAGACGATGAGGCGGAAGATCAG
TGAAAACCAGAAAGACATCGAAGAGATCAAGAGGCAAAACAACATAATAG
CTAAGCAGATACAAGCACTGGAGAGTTCAAATGGGGATCAGTTCAGCGAA
TTTCTCAGCGACGAGGAAGTGGGCAGCGAGGAGGCCGACGACGAAGACCT
CGACCAGGACTTCAGTAGACGCAATAAAAAGATGAAGACCTTCCACGCAG
CAAGCTTTCTAGACCAT

BO21305.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:17:04
Subject Length Description Subject Range Query Range Score Percent Strand
Max-RD 486 CG9648-PD 1..483 17..499 2415 100 Plus
Max-RC 486 CG9648-PC 1..483 17..499 2415 100 Plus
Max-RA 486 CG9648-PA 1..483 17..499 2415 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:17:07
Subject Length Description Subject Range Query Range Score Percent Strand
Max-RD 1289 CG9648-RD 158..642 15..499 2425 100 Plus
Max-RC 822 CG9648-RC 158..642 15..499 2425 100 Plus
Max-RA 995 CG9648-RA 158..642 15..499 2425 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:17:01
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19262879..19263018 499..360 700 100 Minus
3L 28110227 3L 19263084..19263209 359..234 630 100 Minus
3L 28110227 3L 19263416..19263526 236..126 555 100 Minus
3L 28110227 3L 19263839..19263905 128..62 335 100 Minus
3L 28110227 3L 19263980..19264027 62..15 240 100 Minus
Blast to na_te.dros performed 2014-11-27 20:17:03
Subject Length Description Subject Range Query Range Score Percent Strand
gypsy4 6852 gypsy4 GYPSY4 6852bp 508..608 271..368 119 60.4 Plus

BO21305.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-07-27 12:13:29 Download gff for BO21305.complete
Subject Subject Range Query Range Percent Splice Strand
Max-RA 167..649 17..501 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:06:05 Download gff for BO21305.complete
Subject Subject Range Query Range Percent Splice Strand
Max-RA 160..642 17..501 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:18:36 Download gff for BO21305.complete
Subject Subject Range Query Range Percent Splice Strand
Max-RA 160..642 17..501 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:18:36 Download gff for BO21305.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19262875..19263018 360..501 98 <- Minus
3L 19263084..19263207 236..359 100 <- Minus
3L 19263417..19263524 128..235 100 <- Minus
3L 19263840..19263905 62..127 100 <- Minus
3L 19263981..19264025 17..61 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:06:05 Download gff for BO21305.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19256940..19257005 62..127 100 <- Minus
arm_3L 19257081..19257125 17..61 100   Minus
arm_3L 19255975..19256118 360..501 98 <- Minus
arm_3L 19256184..19256307 236..359 100 <- Minus
arm_3L 19256517..19256624 128..235 100 <- Minus

BO21305.pep Sequence

Translation from 16 to 517

> BO21305.pep
MSMSDDDRDIDIESDEDGDSDTGLGSSRHTNTANFTQAEKRAHHNALERR
RRDHIKESFTNLREAVPTLKGEKASRAQILKKTTECIQTMRRKISENQKD
IEEIKRQNNIIAKQIQALESSNGDQFSEFLSDEEVGSEEADDEDLDQDFS
RRNKKMKTFHAASFLDH

BO21305.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:52:06
Subject Length Description Subject Range Query Range Score Percent Strand
Max-PD 161 CG9648-PD 1..161 1..161 818 100 Plus
Max-PC 161 CG9648-PC 1..161 1..161 818 100 Plus
Max-PA 161 CG9648-PA 1..161 1..161 818 100 Plus