BO21319.complete Sequence
571 bp assembled on 2009-07-17
GenBank Submission: KX794812
> BO21319.complete
GAAGTTATCAGTCGACATGGAATACACCACCAAGACCCAGATCTACCAGA
AGGTGAAGAAGCCAATGCTGGAGCGCCAGCGACGTGCCCGCATGAACAAG
TGCCTGGACAACCTGAAAACACTTGTCGCCGAGCTACGAGGTGATGATGG
CATCCTGCGCATGGACAAGGCCGAGATGCTCGAGTCAGCGGTGATCTTCA
TGCGCCAGCAAAAGACACCAAAGAAGGTGGCTCAGGAAGAACAATCCCTC
CCCCTGGACAGCTTTAAGAATGGCTACATGAATGCCGTCAACGAGGTGTC
ACGTGTCATGGCCTCCACACCTGGCATGAGCGTCGACCTGGGCAAATCGG
TGATGACTCACCTGGGACGCGTCTACAAGAACTTGCAGCAATTCCACGAA
GCACAGTCCGCCGCCGACTTCATCCAGAACTCGATGGACTGCTCCTCAAT
GGACAAGGCTCCGCTCAGCCCCGCCTCCTCCGGATATCACAGCGACTGCG
ACAGCCCCGCCCCCTCGCCACAGCCCATGCAGCAGCCCTTGTGGCGCCCC
TGGGCAAGCTTTCTAGACCAT
BO21319.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:48:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| E(spl)m8-HLH-RA | 540 | CG8365-PA | 1..537 | 17..553 | 2685 | 100 | Plus |
| E(spl)m5-HLH-RA | 537 | CG6096-PA | 38..368 | 30..366 | 385 | 75.7 | Plus |
| E(spl)mbeta-HLH-RA | 588 | CG14548-PA | 43..102 | 50..109 | 180 | 86.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:48:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| E(spl)m8-HLH-RA | 769 | CG8365-RA | 85..621 | 17..553 | 2685 | 100 | Plus |
| E(spl)m5-HLH-RA | 882 | CG6096-RA | 121..451 | 30..366 | 385 | 75.7 | Plus |
| E(spl)mbeta-HLH-RA | 978 | CG14548-RA | 173..232 | 50..109 | 180 | 86.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:48:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26040324..26040860 | 17..553 | 2685 | 100 | Plus |
| 3R | 32079331 | 3R | 26029285..26029615 | 366..30 | 385 | 75.7 | Minus |
| 3R | 32079331 | 3R | 26005792..26005851 | 109..50 | 180 | 86.7 | Minus |
Blast to na_te.dros performed on 2014-11-27 23:48:51 has no hits.
BO21319.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-07-27 12:13:31 Download gff for
BO21319.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| E(spl)-RA | 1..537 | 17..555 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:38:44 Download gff for
BO21319.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| E(spl)m8-HLH-RA | 85..621 | 17..555 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:08:52 Download gff for
BO21319.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| E(spl)m8-HLH-RA | 85..621 | 17..555 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:08:52 Download gff for
BO21319.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26040324..26040860 | 17..555 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:38:44 Download gff for
BO21319.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21866046..21866582 | 17..555 | 99 | | Plus |
BO21319.pep Sequence
Translation from 16 to 571
> BO21319.pep
MEYTTKTQIYQKVKKPMLERQRRARMNKCLDNLKTLVAELRGDDGILRMD
KAEMLESAVIFMRQQKTPKKVAQEEQSLPLDSFKNGYMNAVNEVSRVMAS
TPGMSVDLGKSVMTHLGRVYKNLQQFHEAQSAADFIQNSMDCSSMDKAPL
SPASSGYHSDCDSPAPSPQPMQQPLWRPWASFLDH
BO21319.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:52:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| E(spl)m8-HLH-PA | 179 | CG8365-PA | 1..179 | 1..179 | 933 | 100 | Plus |
| E(spl)m5-HLH-PA | 178 | CG6096-PA | 11..178 | 3..179 | 521 | 60.9 | Plus |
| E(spl)m7-HLH-PA | 186 | CG8361-PA | 8..186 | 5..179 | 306 | 40.7 | Plus |
| E(spl)mbeta-HLH-PA | 195 | CG14548-PA | 8..195 | 5..179 | 291 | 38.1 | Plus |
| E(spl)mgamma-HLH-PA | 205 | CG8333-PA | 6..205 | 1..179 | 288 | 35 | Plus |
