BO21325.complete Sequence
601 bp assembled on 2009-07-17
GenBank Submission: KX799079
> BO21325.complete
GAAGTTATCAGTCGACATGAGCTACTACTACTCGTCTGCCTCCGAGGAGG
ATGGCAGTTCCCAGTACCTGGGCAGTCCCAACTACAACTTGACCCAGTTG
CCGCCAGTTTCTGGCCAGGATTACGGACAGGGGGCTTTCTTATCGCCGGA
ATGGCAATTCTTGGATGCCGCAGGCGGAACTCAAACGGAACTAGGACCCA
TCATGGAGGCGCAAGGACAGCACACCCAGCCGCAGACCAAACGGCGGAGT
AACAGCTTCACAGGATCGGACGGTAGGAAGAGCAGTCCAGAGCAGACCAA
TCTCAGTCCCACGGTCCAGAAAAGGAGACGACAGGCTGCCAATGCGCGGG
AAAGGAAGCGGATGAATGGATTGAATGCGGCTTTCGAGCGCCTAAGGGAA
GTGGTGCCCGCTCCGTCCATTGACCAGAAATTGTCCAAGTTCGAGACTCT
CCAGATGGCCCAGTCCTACATCCTGGCGCTGTGCGATCTTCTCAACAACG
GGGACGTGGAAGTGGATGCCGCTGCATACACCATCTTCGGCGACAGCGAT
AGTGGATTTGGATTGAGCGGAGGATCCTTGTCAGCAAGCTTTCTAGACCA
T
BO21325.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:38:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cato-RA | 570 | CG7760-PA | 1..567 | 17..583 | 2835 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:38:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cato-RA | 712 | CG7760-RA | 39..605 | 17..583 | 2835 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:38:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16277792..16278358 | 583..17 | 2835 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:38:49 has no hits.
BO21325.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-07-27 12:13:32 Download gff for
BO21325.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cato-RA | 1..567 | 17..585 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:56:35 Download gff for
BO21325.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cato-RA | 40..606 | 17..585 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:24:04 Download gff for
BO21325.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cato-RA | 39..605 | 17..585 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:24:04 Download gff for
BO21325.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16277790..16278358 | 17..585 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:56:35 Download gff for
BO21325.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12165295..12165863 | 17..585 | 99 | | Minus |
BO21325.pep Sequence
Translation from 16 to 601
> BO21325.pep
MSYYYSSASEEDGSSQYLGSPNYNLTQLPPVSGQDYGQGAFLSPEWQFLD
AAGGTQTELGPIMEAQGQHTQPQTKRRSNSFTGSDGRKSSPEQTNLSPTV
QKRRRQAANARERKRMNGLNAAFERLREVVPAPSIDQKLSKFETLQMAQS
YILALCDLLNNGDVEVDAAAYTIFGDSDSGFGLSGGSLSASFLDH
BO21325.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:52:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cato-PA | 189 | CG7760-PA | 1..189 | 1..189 | 972 | 100 | Plus |
| ato-PA | 312 | CG7508-PA | 237..311 | 83..159 | 200 | 55.8 | Plus |
| amos-PA | 198 | CG10393-PA | 102..195 | 68..160 | 199 | 50 | Plus |
| tx-PB | 384 | CG5441-PB | 63..163 | 56..165 | 152 | 37.6 | Plus |
| tx-PA | 384 | CG5441-PA | 63..163 | 56..165 | 152 | 37.6 | Plus |
