BO21331.complete Sequence
629 bp assembled on 2009-07-17
> BO21331.complete
GAAGTTATCAGTCGACATGTTGACCAACAACGAGCTAATGGAGCAGTTCT
ACTTCCCCGACGAAGCCCCAGCGATTCCCGAGTTCCTGAGCAACGACACC
TTCCAGCAGTTGGAGCAGCTCATGTACCAGCAGGAGTTCAGCACCAGCGA
CAGCCAGTCGGATGGCGCCAACAGTTGCTCCTTGGAGATGTATTACGATA
CGCCGTCTGTCCTGGAATTGGAGCACATGCTGAATGCCCAGGAGCAGCAG
CAGCACCACCTTCAAGCGAATCCCTTGGGCAAGAATCAGGGCAGAAGTCC
AAGGTACTGGAACAAGCAGCAGAGGAGCAAGCCATACGACAAGCTGTCCA
CTTCCATGTCATCATCTACATCCTCCGCCTCTTCGAGCAGTTCATCGTCC
GCGGGATTCGGTGGCGAAGTCCTCAAAAAACGGCGACTGGCCGCCAATGC
TCGGGAACGGAGGCGGATGAACAGCCTGAACGATGCCTTCGACAAGTTGA
GAGATGTGGTTCCATCACTCGGCCACGATCGGCGACTCTCCAAATACGAA
ACTCTGCAAATGGCGCAAGCATACATCGGGGATCTGGTCACGTTGCTGTC
CAGAGACTACTGCAAGCTTTCTAGACCAT
BO21331.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:36:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| amos-RA | 597 | CG10393-PA | 1..595 | 17..611 | 2975 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:36:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| amos-RA | 786 | CG10393-RA | 14..610 | 15..611 | 2985 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:36:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18596312..18596908 | 611..15 | 2985 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:36:55 has no hits.
BO21331.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-07-27 12:13:33 Download gff for
BO21331.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| amos-RA | 300..892 | 22..613 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:19:30 Download gff for
BO21331.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| amos-RA | 21..613 | 22..613 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:26:25 Download gff for
BO21331.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| amos-RA | 21..613 | 22..613 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:26:25 Download gff for
BO21331.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18596309..18596901 | 22..613 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:19:30 Download gff for
BO21331.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18596309..18596901 | 22..613 | 99 | | Minus |
BO21331.pep Sequence
Translation from 16 to 628
> BO21331.pep
MLTNNELMEQFYFPDEAPAIPEFLSNDTFQQLEQLMYQQEFSTSDSQSDG
ANSCSLEMYYDTPSVLELEHMLNAQEQQQHHLQANPLGKNQGRSPRYWNK
QQRSKPYDKLSTSMSSSTSSASSSSSSSAGFGGEVLKKRRLAANARERRR
MNSLNDAFDKLRDVVPSLGHDRRLSKYETLQMAQAYIGDLVTLLSRDYCK
LSRP
BO21331.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:52:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| amos-PA | 198 | CG10393-PA | 1..198 | 1..198 | 1014 | 100 | Plus |
| ato-PA | 312 | CG7508-PA | 252..311 | 135..194 | 203 | 70 | Plus |
| cato-PA | 189 | CG7760-PA | 68..160 | 102..195 | 199 | 50 | Plus |
| dimm-PB | 390 | CG8667-PB | 129..212 | 111..194 | 173 | 44 | Plus |
| Fer3-PA | 195 | CG6913-PA | 63..143 | 116..195 | 170 | 50.6 | Plus |
