BO21706.complete Sequence
448 bp assembled on 2009-12-07
GenBank Submission: KX796811
> BO21706.complete
GAAGTTATCAGTCGACATGTGCCAACAAGTCGTTGTCGTCGCCAACACCA
ACAACAAGATGAAGACCAGCTACAGCATCAAGCAGGTCCTGAAGACGCTC
TTCAAGAAGCAACAGAAGCAGCAGCAGAAGCCTCAGGGATCTCTGGAATC
GCTAGAATCCGTCGACAATCTGCGCAACGCCCAGGTTGAGGAGGCCTACT
ATGCCGAGATCGATGAGAACGCCGCCAACGAGAAGCTGGCCCAATTGGCT
CACTCTCAGGAGTTCGAGATTGTCGAGGAGCAGGAGGACGAGGAGGATGT
CTATGTCCCAGTTCGCTTCGCTCGCACCACCGCCGGCACCTTCTTCTGGA
CCACCAACCTTCAGCCAGTCGCCAGCGTTGAGCCCGCCATGTGCTACTCC
ATGCAATTCCAGGATCGTTGGGCCCAGGCTGCAAGCTTTCTAGACCAT
BO21706.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:04:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| E(spl)malpha-BFM-RA | 417 | CG8337-PA | 1..414 | 17..430 | 2070 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:04:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| E(spl)malpha-BFM-RA | 676 | CG8337-RA | 71..484 | 17..430 | 2070 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:04:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26010963..26011376 | 17..430 | 2070 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 10:04:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6785..6883 | 43..136 | 131 | 63.6 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1070..1101 | 104..135 | 115 | 84.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2337..2389 | 103..156 | 105 | 68.5 | Plus |
BO21706.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:38:38 Download gff for
BO21706.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| malpha-RA | 1..414 | 17..432 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:15:15 Download gff for
BO21706.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| E(spl)malpha-BFM-RA | 71..484 | 17..432 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:12:07 Download gff for
BO21706.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| E(spl)malpha-BFM-RA | 71..484 | 17..432 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:12:07 Download gff for
BO21706.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26010963..26011376 | 17..432 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:15:15 Download gff for
BO21706.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21836685..21837098 | 17..432 | 99 | | Plus |
BO21706.pep Sequence
Translation from 16 to 448
> BO21706.pep
MCQQVVVVANTNNKMKTSYSIKQVLKTLFKKQQKQQQKPQGSLESLESVD
NLRNAQVEEAYYAEIDENAANEKLAQLAHSQEFEIVEEQEDEEDVYVPVR
FARTTAGTFFWTTNLQPVASVEPAMCYSMQFQDRWAQAASFLDH
BO21706.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:07:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| E(spl)malpha-BFM-PA | 138 | CG8337-PA | 1..138 | 1..138 | 706 | 100 | Plus |
| E(spl)m4-BFM-PA | 152 | CG6099-PA | 1..152 | 1..138 | 217 | 39.8 | Plus |
| Ocho-PB | 149 | CG3396-PB | 11..149 | 10..138 | 161 | 36.5 | Plus |
| Ocho-PC | 149 | CG3396-PC | 11..149 | 10..138 | 161 | 36.5 | Plus |
