Clone BO21713 Report

Search the DGRC for BO21713

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:217
Well:13
Vector:pDNR-Dual
Associated Gene/TranscriptCG30184-RA
Protein status:BO21713.pep: Imported from assembly
Sequenced Size:703

Clone Sequence Records

BO21713.complete Sequence

703 bp assembled on 2010-01-06

GenBank Submission: KX797049

> BO21713.complete
GAAGTTATCAGTCGACATGCAGGTGCGCTCCAAGAAGCCCGTTTGGTTCC
TGTTCAAGATGATGGAGCTGCTGCTGAGCCTGGGCTGCTGCCTCGTCCAT
TGGACCTGCTTCATGGAGGAGGGTGTGCCGCACATCTTCCTGCTGTGCGG
AACGTACGGCGGCTCGGTGATCATATGCTTCATATCACTGATTGGAGCTT
TCTACGCCGAGCGGCCGACGATGAAGCACGAGGCGCTGTTCGGTGGGATC
TTGGGTGGCCTGCACATGGTCACCGTGTACGCCAACATGTATGTGGCCAC
TTTGGAGGAGTTCCGCACTGAGCGCTGGCCCAGCTTCTATGCGTGCTGTC
GGGACAACGCCATTGTGGCTCTGTACGCCGGCGCCATTTATCTGATGCAC
TGCACCTTCGCTCTGGATCTCATGTTCTCCCACTCACGCAGTCGGGCGAA
TCAGAAGATGCATCCACAGCGGAGCAAGCGACCACTGCAGCTGTACTTCA
TCAGCCGGGGCGCGGAGGCCTATCTCAGTCGCTTCTGGTTCTTTCGGCGC
ATCGCCGCCAGGATGCTGACCAGCGCCCAGCCATCGGAGCATTCCGGCCG
GAAGCGGCAGGTCTCGTCCTCCGAGTCGGACTCGGATGCCAAGGAGAGGG
AGGAGGAGCGGATTAGGAACTCGGAGGTTTTCAAAGCAAGCTTTCTAGAC
CAT

BO21713.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:19:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG30184-RA 672 CG30184-PA 1..669 17..685 3345 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:19:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG30184-RA 808 CG30184-RA 105..775 15..685 3355 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:19:04
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23564077..23564747 15..685 3355 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:19:05 has no hits.

BO21713.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-01-06 09:26:06 Download gff for BO21713.complete
Subject Subject Range Query Range Percent Splice Strand
CG30184-RA 1..669 17..687 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:16:28 Download gff for BO21713.complete
Subject Subject Range Query Range Percent Splice Strand
CG30184-RA 51..719 17..687 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:26:38 Download gff for BO21713.complete
Subject Subject Range Query Range Percent Splice Strand
CG30184-RA 107..775 17..687 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:26:38 Download gff for BO21713.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23564079..23564747 17..687 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:16:28 Download gff for BO21713.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19451602..19452270 17..687 99   Plus

BO21713.pep Sequence

Translation from 16 to 703

> BO21713.pep
MQVRSKKPVWFLFKMMELLLSLGCCLVHWTCFMEEGVPHIFLLCGTYGGS
VIICFISLIGAFYAERPTMKHEALFGGILGGLHMVTVYANMYVATLEEFR
TERWPSFYACCRDNAIVALYAGAIYLMHCTFALDLMFSHSRSRANQKMHP
QRSKRPLQLYFISRGAEAYLSRFWFFRRIAARMLTSAQPSEHSGRKRQVS
SSESDSDAKEREEERIRNSEVFKASFLDH

BO21713.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:03:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG30184-PA 223 CG30184-PA 1..223 1..223 1183 100 Plus