BO21730.complete Sequence
1102 bp assembled on 2010-01-06
GenBank Submission: KX794246
> BO21730.complete
GAAGTTATCAGTCGACATGCCGGAGTTCGTGAGAGTGGCAATTAACGAAA
GCCTTTGGGAGTTCCCGGATATATACGAGTTCGTTCGTTTTCTGGGTGGC
GGTTCCTTTGGCCAGGTGGCTAAGGTGAGACTACGAGGCACTGAAAATTA
CTTCGCTATGAAAAGGCTTATGCGCCCATTCGAGAGGGAGGAGGATGCTA
AGGGTACCTATCGCGAGATCCGTCTGCTGAAGCACATGAATCATCGAAAT
GTTATCAGCCTGCTGAACGTCTTCCATCCACCAGCGCACAACATGATGGA
ATTTCAGCAGGTTTATTTGGTGACTCACCTGATGGACGCGGATTTGCACA
GGTACTCGCGTTCGAAAAGGATGAGCGATCAAGAGATTAGGATAATCCTT
TACCAAATACTGCGGGGACTGAAGTACATACATAGTGCCGGGGTTGTTCA
TCGAGACTTAAAGCCCTGCAATATCGCAGTTAATGGAAATAGCGAGGTGC
GCATACTTGACTTCGGTTTATCCCGTATGTGCGCAGACAAAATGACGGAC
CATGTTGGAACTATGTGGTATCTAGCTCCGGAAATTATCTTTTTAAGGGG
TCAATACACAAAGGCAATTGACGTGTGGTCGGTTGGTTGCATTCTGGCGG
AACTTATCACGGATCGTGTCCTGTTTCGCGGTGAAAACTATGTAAGCCAA
ATACGATGTCTGATTAACATAATGGGTACTCCGACGAGGGAGTTTATCAC
CGGGATAAGCATGGAACGTTCGCGTAATTACCTGGAGGGGTACCCGTTAC
GACAAAGGTGCGATTTTCATCACCTGTTTATGGGTTACGATGTCCAGGCC
ATCGATTTGATGGAAAAAATGCTCGAAATGGTACCCGAAAAACGTATCAC
AGCTGCGGAAGCAATGCTCCATCCATACCTTCGGGATCTTATTGAGCCAC
ACCATCATGCCGAAGACACCGCACCAGTCTATGATCAGAACTTCGAAAAC
ATGGTACTGCCTGTAAAATGCTGGAAAGAACTTGTTTCCCACGAGATTCG
GAACTTCAGACCTGACCAACTTGATTTGCATTTTGCAAGCTTTCTAGACC
AT
BO21730.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:18:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| p38c-RA | 1071 | CG33338-PA | 1..1068 | 17..1084 | 5340 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:18:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| p38c-RA | 1184 | CG33338-RA | 22..1089 | 17..1084 | 5340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:18:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24149115..24150182 | 1084..17 | 5340 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:18:55 has no hits.
BO21730.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-01-06 09:26:06 Download gff for
BO21730.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| p38c-RA | 1..1068 | 17..1086 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:16:24 Download gff for
BO21730.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| p38c-RA | 22..1089 | 17..1086 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:26:33 Download gff for
BO21730.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| p38c-RA | 22..1089 | 17..1086 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:26:33 Download gff for
BO21730.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24149113..24150182 | 17..1086 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:16:24 Download gff for
BO21730.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19974835..19975904 | 17..1086 | 99 | | Minus |
BO21730.pep Sequence
Translation from 16 to 1102
> BO21730.pep
MPEFVRVAINESLWEFPDIYEFVRFLGGGSFGQVAKVRLRGTENYFAMKR
LMRPFEREEDAKGTYREIRLLKHMNHRNVISLLNVFHPPAHNMMEFQQVY
LVTHLMDADLHRYSRSKRMSDQEIRIILYQILRGLKYIHSAGVVHRDLKP
CNIAVNGNSEVRILDFGLSRMCADKMTDHVGTMWYLAPEIIFLRGQYTKA
IDVWSVGCILAELITDRVLFRGENYVSQIRCLINIMGTPTREFITGISME
RSRNYLEGYPLRQRCDFHHLFMGYDVQAIDLMEKMLEMVPEKRITAAEAM
LHPYLRDLIEPHHHAEDTAPVYDQNFENMVLPVKCWKELVSHEIRNFRPD
QLDLHFASFLDH
BO21730.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:02:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| p38c-PA | 356 | CG33338-PA | 1..356 | 1..356 | 1893 | 100 | Plus |
| p38a-PC | 366 | CG5475-PC | 8..354 | 3..349 | 953 | 52.7 | Plus |
| p38a-PB | 366 | CG5475-PB | 8..354 | 3..349 | 953 | 52.7 | Plus |
| p38a-PA | 366 | CG5475-PA | 8..354 | 3..349 | 953 | 52.7 | Plus |
| p38b-PA | 365 | CG7393-PA | 5..353 | 1..349 | 941 | 50.7 | Plus |
