BO21737.complete Sequence
1243 bp assembled on 2010-01-08
GenBank Submission: KX797931
> BO21737.complete
GAAGTTATCAGTCGACATGGATGACCGAAATGAGATACCTCAGGATGGCC
CCGCCAGCATGGAACCCGAGGGCGTCATCGAGTCCACCTGGCACGAGGTG
TACGACAACTTCGATGACATGAACTTGCGCGAGGAGTTGCTGCGCGGCAT
CTACGGTTATGGTTTCGAGAAGCCGTCGGCCATCCAGCAGCGCGCCATCA
TTCCCTGTGTGAGGGGTCGCGATGTCATTGCCCAGGCCCAGTCGGGAACT
GGCAAGACTGCCACCTTCTCGATTGCTATCCTTCAGCAAATCGACACGAG
CATTCGCGAGTGCCAGGCGCTGATCCTGGCCCCCACTCGCGAGTTGGCCA
CGCAGATCCAGCGCGTGGTGATGGCGCTCGGCGAGTACATGAAGGTGCAC
TCGCACGCCTGCATTGGCGGCACTAACGTGCGCGAAGACGCCCGCATCTT
GGAATCCGGTTGCCATGTGGTGGTGGGCACTCCTGGCCGCGTCTACGACA
TGATCAACCGCAAGGTGCTGCGCACCCAGTACATCAAGCTGTTCGTGCTG
GATGAGGCCGATGAGATGTTGTCCCGCGGTTTCAAGGATCAGATCCAGGA
TGTCTTCAAGATGCTGCCCCCAGATGTGCAGGTCATCCTGCTGTCCGCCA
CCATGCCGCCGGATGTGCTCGAAGTGAGCCGTTGCTTCATGCGTGATCCC
GTCAGCATCCTGGTTAAGAAGGAGGAACTGACCCTTGAGGGTATCAAGCA
GTTTTACGTCAACGTGAAGCAGGAGAACTGGAAACTGGGCACCCTTTGCG
ATCTGTACGATACGCTGTCCATCACCCAGTCGGTAATCTTCTGCAACACC
CGTCGCAAGGTGGACCAACTGACCCAGGAGATGTCTATCCACAACTTCAC
CGTCTCGGCCATGCACGGCGACATGGAGCAGCGTGATCGCGAGGTCATCA
TGAAACAATTCCGTTCGGGCTCGTCTCGTGTTCTGATTACCACTGATTTA
CTGGCGCGCGGTATTGATGTGCAGCAGGTGTCGTTGGTCATCAACTATGA
TCTGCCCTCGAACCGCGAGAACTACATTCATAGAATTGGTCGCGGTGGTC
GTTTCGGTCGCAAGGGTGTTGCGATCAACTTTATTACAGATGATGATCGA
CGAATCCTTAAGGATATTGAACAGTTCTACCACACAACAATTGAGGAAAT
GCCTGCTAATATTGCCGATTTGATTGCAAGCTTTCTAGACCAT
BO21737.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:24:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF-4a-RF | 1212 | CG9075-PF | 1..1209 | 17..1225 | 6045 | 100 | Plus |
| eIF-4a-RE | 1212 | CG9075-PE | 1..1209 | 17..1225 | 6045 | 100 | Plus |
| eIF-4a-RD | 1212 | CG9075-PD | 1..1209 | 17..1225 | 6045 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:24:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF-4a-RF | 1939 | CG9075-RF | 227..1435 | 17..1225 | 6045 | 100 | Plus |
| eIF-4a-RE | 2021 | CG9075-RE | 71..1279 | 17..1225 | 6045 | 100 | Plus |
| eIF-4a-RD | 1960 | CG9075-RD | 458..1666 | 17..1225 | 6045 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:24:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5984010..5984626 | 245..861 | 3085 | 100 | Plus |
| 2L | 23513712 | 2L | 5983010..5983237 | 19..246 | 1140 | 100 | Plus |
| 2L | 23513712 | 2L | 5984717..5984942 | 858..1083 | 1130 | 100 | Plus |
| 2L | 23513712 | 2L | 5985024..5985167 | 1082..1225 | 720 | 100 | Plus |
| 3R | 32079331 | 3R | 8314210..8314617 | 725..1132 | 450 | 74 | Plus |
Blast to na_te.dros performed 2014-11-28 02:24:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| blood | 7410 | blood BLOOD 7410bp | 433..470 | 1187..1225 | 156 | 92.3 | Plus |
BO21737.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-01-08 08:57:34 Download gff for
BO21737.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF-4a-RB | 297..1505 | 17..1227 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:47 Download gff for
BO21737.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF-4a-RD | 227..1435 | 17..1227 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:28:45 Download gff for
BO21737.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF-4a-RD | 458..1666 | 17..1227 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:28:45 Download gff for
BO21737.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5983008..5983236 | 17..245 | 99 | -> | Plus |
| 2L | 5984011..5984624 | 246..859 | 100 | -> | Plus |
| 2L | 5984719..5984942 | 860..1083 | 100 | -> | Plus |
| 2L | 5985026..5985167 | 1084..1227 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:47 Download gff for
BO21737.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5983008..5983236 | 17..245 | 99 | -> | Plus |
| arm_2L | 5984011..5984624 | 246..859 | 100 | -> | Plus |
| arm_2L | 5984719..5984942 | 860..1083 | 100 | -> | Plus |
| arm_2L | 5985026..5985167 | 1084..1227 | 98 | | Plus |
BO21737.pep Sequence
Translation from 16 to 1243
> BO21737.pep
MDDRNEIPQDGPASMEPEGVIESTWHEVYDNFDDMNLREELLRGIYGYGF
EKPSAIQQRAIIPCVRGRDVIAQAQSGTGKTATFSIAILQQIDTSIRECQ
ALILAPTRELATQIQRVVMALGEYMKVHSHACIGGTNVREDARILESGCH
VVVGTPGRVYDMINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQDVFKML
PPDVQVILLSATMPPDVLEVSRCFMRDPVSILVKKEELTLEGIKQFYVNV
KQENWKLGTLCDLYDTLSITQSVIFCNTRRKVDQLTQEMSIHNFTVSAMH
GDMEQRDREVIMKQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNR
ENYIHRIGRGGRFGRKGVAINFITDDDRRILKDIEQFYHTTIEEMPANIA
DLIASFLDH
BO21737.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:37:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF-4a-PF | 403 | CG9075-PF | 1..403 | 1..403 | 2070 | 100 | Plus |
| eIF-4a-PE | 403 | CG9075-PE | 1..403 | 1..403 | 2070 | 100 | Plus |
| eIF-4a-PD | 403 | CG9075-PD | 1..403 | 1..403 | 2070 | 100 | Plus |
| eIF-4a-PB | 403 | CG9075-PB | 1..403 | 1..403 | 2070 | 100 | Plus |
| eIF-4a-PC | 403 | CG9075-PC | 1..403 | 1..403 | 2070 | 100 | Plus |
