Clone BO21743 Report

Search the DGRC for BO21743

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:217
Well:43
Vector:pDNR-Dual
Associated Gene/TranscriptZpr1-RA
Protein status:BO21743.pep: Imported from assembly
Sequenced Size:1405

Clone Sequence Records

BO21743.complete Sequence

1405 bp assembled on 2010-01-08

GenBank Submission: KX796787

> BO21743.complete
GAAGTTATCAGTCGACATGTCCACCGTGAGCGACCCCAACAGTAGCAATC
CGCCGGAGAGTGCGGGGAACATTCGGCCGGAGCCCATTTTCCGGGAAATC
AATGCGGAGCAGACCGACGAGATAGTGGAGGTCGAATCCGCCTGCATGAA
CTGCTTCGAAACGGGAGTCACTCGGCTGCTGCCCACCAAGATACCCTTTT
TTCGCGAGGTGGTGCTCATGTCCTTCAAGTGCGACCACTGCGGCCACATC
AACAACGAGATGCAGTCGGCATCGGAGATCCAAAAGTCCGGCATTCGCAT
CGAACTGCGAGTGCAATCCGTGGCTGATCTCAATCGGCGCGTGGTGCGCT
CGGATAACTCCAGCATCAGCATACCGGAGATCGAGCTAGAGATTCCGGTG
CAGTCGCAGAAGGGCGAGGTGACCACCGTCGAAGGCATCATCGAGCGGAC
GATAGCCGGCTTGTCGCAGGATCAGGAGAAGCGGCGCATCGATCATCCGG
AGACAGCTGCTTCAATTGAAAAGTACATCGAGCGATTGCACCGCCTAAAG
GAGGTGACAACACCCTTTCAAGTGCTTCTCGAGGACATATCCGGCAATAG
TTTCATCGAGAATCCCCTGGCACCTGCCGCCGATCCGCAGCTAAAGACTT
CGTACTTCACACGCAGCCAGCAGCAGAACGAGCAATTGGGCCTGTACGAG
CAGAATCACGAGGAGCAGCACTTGTTGAAGCCGATTGCCGAGGACTCGTG
GCCCATTGAGAATCTGCACGGCGAAGTGCTTCAGTTCCCCACCAATTGTC
CCAGCTGCCAGGCGCCCTGCGAGACGAACATGAAGCTGACAAACATACCG
CACTTCAAGGAGGTGGTGATCATGGCCACCGTTTGCGGTGCCTGTGGCCA
CAAGACGAACGAAGTGAAGTCCGGCGGCGGAGTGGAGGCGCAGGGTGTAC
GCTTCCGCGTCCAGATTGCCAGCAGGGAGGATCTGACGCGTGATGTCCTC
AAGTCGGAGACGTGCAGCATGTCTATTCCAGAGCTGGACCTCGAGGTGGG
TCCGCATGCCCTGTGCGGGCGATTCACCACCGTGGAGGGTCTGCTGGTTG
CCATGCGGGATCAGTTGGACGGCACGCTTTTCCACGACTCCGCCGACGAC
GCGACCAAGCAGCAGATGCAGCGATTCCTTGACACCTTCGAGGATGTCAT
GAATCTGAAGCGAGTCATTACGCTGGTGCTGGAGGATCCGGCCGGTAATA
CCTATGTGCAATCACTGAGCGATGACGACTCGGAGCCGGATGACAAGCTC
ACTGTGGAGCGGTACGATCGCTCCTACGAGGACAACGAGGATCTGGGCCT
CAATGACATGAAGACCGAGGGCTACGAGGAGAAGGCGGCAAGCTTTCTAG
ACCAT

BO21743.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:25:10
Subject Length Description Subject Range Query Range Score Percent Strand
Zpr1-RA 1374 CG9060-PA 1..1371 17..1387 6855 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:25:11
Subject Length Description Subject Range Query Range Score Percent Strand
Zpr1-RA 1853 CG9060-RA 116..1487 16..1387 6860 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:25:07
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9160490..9161188 1387..689 3495 100 Minus
X 23542271 X 9161301..9161975 690..16 3375 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:25:09 has no hits.

BO21743.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-01-08 08:57:38 Download gff for BO21743.complete
Subject Subject Range Query Range Percent Splice Strand
Zpr1-RA 68..1438 17..1389 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:18:56 Download gff for BO21743.complete
Subject Subject Range Query Range Percent Splice Strand
Zpr1-RA 117..1487 17..1389 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:28:54 Download gff for BO21743.complete
Subject Subject Range Query Range Percent Splice Strand
Zpr1-RA 117..1487 17..1389 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:28:54 Download gff for BO21743.complete
Subject Subject Range Query Range Percent Splice Strand
X 9160487..9161187 690..1389 99 <- Minus
X 9161302..9161974 17..689 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:18:56 Download gff for BO21743.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 9054520..9055220 690..1389 99 <- Minus
arm_X 9055335..9056007 17..689 100   Minus

BO21743.pep Sequence

Translation from 16 to 1405

> BO21743.pep
MSTVSDPNSSNPPESAGNIRPEPIFREINAEQTDEIVEVESACMNCFETG
VTRLLPTKIPFFREVVLMSFKCDHCGHINNEMQSASEIQKSGIRIELRVQ
SVADLNRRVVRSDNSSISIPEIELEIPVQSQKGEVTTVEGIIERTIAGLS
QDQEKRRIDHPETAASIEKYIERLHRLKEVTTPFQVLLEDISGNSFIENP
LAPAADPQLKTSYFTRSQQQNEQLGLYEQNHEEQHLLKPIAEDSWPIENL
HGEVLQFPTNCPSCQAPCETNMKLTNIPHFKEVVIMATVCGACGHKTNEV
KSGGGVEAQGVRFRVQIASREDLTRDVLKSETCSMSIPELDLEVGPHALC
GRFTTVEGLLVAMRDQLDGTLFHDSADDATKQQMQRFLDTFEDVMNLKRV
ITLVLEDPAGNTYVQSLSDDDSEPDDKLTVERYDRSYEDNEDLGLNDMKT
EGYEEKAASFLDH

BO21743.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:38:03
Subject Length Description Subject Range Query Range Score Percent Strand
Zpr1-PA 457 CG9060-PA 1..457 1..457 2366 100 Plus