BO21745.complete Sequence
1417 bp assembled on 2010-01-08
GenBank Submission: KX794432
> BO21745.complete
GAAGTTATCAGTCGACATGGGCGACTTCGATCTGAATGTGGACAGCTTGA
TACAGCGGCTGCTGGAGAACTTTAAAAAACAAAAAGAGGCCGAAGAGCAC
GCCCAGAAGCTGCTAATCGCTCAACAATTGGCCGCCGCCGGCGGAGCATC
CGGCGCATCTGCCACATCGCCCACATCCAGCAGCAATTACTCGTCGATGG
CGGCGGTGGCCTCCTTTGGATCCGGATACGGATCGGGATCTGGTGCTGGT
GCTCCTGGTGCCGGCGCTGGCCCAGGATCCAGCCATGATCCGCTCGACGA
TCTCACCGAACAGCAGCGCCGTCTGCTCCAGCAATACTCGATATCGCCGC
CCAGCGAGACGATGATATCGGCCGATGGCGACCAGATCACCGTCCATCAT
CCGCGCGAGGAGCCCAAGAAATCCAGATTGAAACTGCGCGATTTTTTCGT
CGCCGAGTTTGTGCGCAGCTGCCGAACGGGCAAACAGGTCCAGATGACGG
AGGCGGAGGTGCGTGGCCTCTGTCTCAAGTCGCGCGAGATCTTCTTGCAA
CAGCCCATCCTGCTGGAACTGGAGGCACCGCTGATCATCTGCGGCGACAT
CCACGGCCAGTACACAGACCTGTTGCGCCTGTTCGAGTACGGCGGATTCC
CTCCGGCTGCCAACTACTTGTTCCTCGGCGACTACGTCGATCGGGGCAAG
CAGTCCCTGGAGACCATCTGTCTGCTGCTGGCCTACAAGATCAAATATCC
GGAGAACTTCTTCTTGTTGCGCGGCAACCACGAGTGCGCCAGTATTAATA
GGATTTACGGCTTCTACGATGAGTGCAAGCGCCGATACAATGTCAAACTG
TGGAAGACTTTCACAGATTGCTTCAACTGTCTGCCGGTAGCCGCCATTAT
TGACGAAAAGATCTTCTGCTGCCACGGCGGCCTCAGTCCCGATCTTCAGG
GCATGGAGCAGATCCGTCGCCTAATGCGACCCACAGATGTGCCGGATACC
GGGTTACTGTGCGATCTTCTGTGGAGTGATCCCGACAAGGATGTTCAGGG
TTGGGGCGAGAATGATCGCGGTGTGAGCTTCACCTTCGGTGTGGATGTGG
TCTCCAAGTTTTTGAACCGCCACGAGCTGGACTTGATCTGCCGTGCACAT
CAGGTTGTGGAGGATGGCTATGAGTTCTTTGCGCGTCGGCAACTGGTCAC
GTTGTTCTCGGCGCCCAATTACTGTGGAGAGTTCGACAATGCCGGCGGAA
TGATGACCGTGGACGACACGCTGATGTGCTCATTCCAGATCCTGAAACCA
TCCGAGAAGAAGGCCAAGTATCTGTACAGCGGAATGAACTCGTCGCGACC
CACAACACCGCAGCGCAGCGCCCCAATGCTTGCGACCAACAAGAAGAAAG
CAAGCTTTCTAGACCAT
BO21745.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:25:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| flw-RA | 1386 | CG2096-PA | 1..1383 | 17..1399 | 6915 | 100 | Plus |
| flw-RC | 993 | CG2096-PC | 53..990 | 462..1399 | 4690 | 100 | Plus |
| flw-RB | 993 | CG2096-PB | 53..990 | 462..1399 | 4690 | 100 | Plus |
| flw-RC | 993 | CG2096-PC | 1..52 | 17..68 | 260 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:25:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| flw-RA | 2524 | CG2096-RA | 553..1935 | 17..1399 | 6915 | 100 | Plus |
| flw-RC | 3883 | CG2096-RC | 605..1542 | 462..1399 | 4690 | 100 | Plus |
| flw-RB | 2131 | CG2096-RB | 605..1542 | 462..1399 | 4690 | 100 | Plus |
| flw-RC | 3883 | CG2096-RC | 553..604 | 17..68 | 260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:25:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10388443..10388835 | 69..461 | 1965 | 100 | Plus |
| X | 23542271 | X | 10406352..10406701 | 461..810 | 1750 | 100 | Plus |
| X | 23542271 | X | 10406761..10407107 | 809..1155 | 1735 | 100 | Plus |
| 3R | 32079331 | 3R | 12424792..12425574 | 1309..527 | 1725 | 81.4 | Minus |
| X | 23542271 | X | 15359441..15360262 | 1309..488 | 1395 | 78 | Minus |
| 3R | 32079331 | 3R | 24518898..24519192 | 516..810 | 755 | 83.7 | Plus |
| X | 23542271 | X | 10407164..10407300 | 1152..1288 | 685 | 100 | Plus |
| X | 23542271 | X | 10407363..10407476 | 1286..1399 | 570 | 100 | Plus |
| 3R | 32079331 | 3R | 24519597..24519868 | 812..1083 | 535 | 79.8 | Plus |
| 2R | 25286936 | 2R | 17955968..17956347 | 939..560 | 415 | 73.9 | Minus |
| Y | 3667352 | Y | 3540059..3540414 | 942..587 | 280 | 71.9 | Minus |
| 2R | 25286936 | 2R | 21881871..21882040 | 945..776 | 265 | 77.1 | Minus |
| X | 23542271 | X | 10386512..10386563 | 17..68 | 260 | 100 | Plus |
| Y | 3667352 | Y | 3539692..3539862 | 1309..1139 | 255 | 76.6 | Minus |
| 3R | 32079331 | 3R | 24519973..24520082 | 1130..1239 | 235 | 80.9 | Plus |
| 2L | 23513712 | 2L | 3110521..3110621 | 1142..1242 | 205 | 80.2 | Plus |
| 2R | 25286936 | 2R | 17955651..17955759 | 1256..1148 | 200 | 78.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:25:27 has no hits.
BO21745.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-01-08 08:57:41 Download gff for
BO21745.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| flw-RA | 580..1962 | 17..1401 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:19:03 Download gff for
BO21745.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| flw-RA | 553..1935 | 17..1401 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:29:02 Download gff for
BO21745.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| flw-RA | 553..1935 | 17..1401 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:29:02 Download gff for
BO21745.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10406353..10406700 | 462..809 | 100 | -> | Plus |
| X | 10388443..10388835 | 69..461 | 100 | -> | Plus |
| X | 10386512..10386563 | 17..68 | 100 | -> | Plus |
| X | 10406762..10407105 | 810..1153 | 100 | -> | Plus |
| X | 10407166..10407300 | 1154..1288 | 100 | -> | Plus |
| X | 10407366..10407476 | 1289..1401 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:19:03 Download gff for
BO21745.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10280545..10280596 | 17..68 | 100 | -> | Plus |
| arm_X | 10282476..10282868 | 69..461 | 100 | -> | Plus |
| arm_X | 10300386..10300733 | 462..809 | 100 | -> | Plus |
| arm_X | 10300795..10301138 | 810..1153 | 100 | -> | Plus |
| arm_X | 10301199..10301333 | 1154..1288 | 100 | -> | Plus |
| arm_X | 10301399..10301509 | 1289..1401 | 98 | | Plus |
BO21745.pep Sequence
Translation from 16 to 1417
> BO21745.pep
MGDFDLNVDSLIQRLLENFKKQKEAEEHAQKLLIAQQLAAAGGASGASAT
SPTSSSNYSSMAAVASFGSGYGSGSGAGAPGAGAGPGSSHDPLDDLTEQQ
RRLLQQYSISPPSETMISADGDQITVHHPREEPKKSRLKLRDFFVAEFVR
SCRTGKQVQMTEAEVRGLCLKSREIFLQQPILLELEAPLIICGDIHGQYT
DLLRLFEYGGFPPAANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL
LRGNHECASINRIYGFYDECKRRYNVKLWKTFTDCFNCLPVAAIIDEKIF
CCHGGLSPDLQGMEQIRRLMRPTDVPDTGLLCDLLWSDPDKDVQGWGEND
RGVSFTFGVDVVSKFLNRHELDLICRAHQVVEDGYEFFARRQLVTLFSAP
NYCGEFDNAGGMMTVDDTLMCSFQILKPSEKKAKYLYSGMNSSRPTTPQR
SAPMLATNKKKASFLDH
BO21745.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:38:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| flw-PA | 461 | CG2096-PA | 1..461 | 1..461 | 2434 | 100 | Plus |
| flw-PC | 330 | CG2096-PC | 18..330 | 149..461 | 1684 | 99.7 | Plus |
| flw-PB | 330 | CG2096-PB | 18..330 | 149..461 | 1684 | 99.7 | Plus |
| Pp1alpha-96A-PB | 327 | CG6593-PB | 17..327 | 149..461 | 1409 | 83.1 | Plus |
| Pp1alpha-96A-PA | 327 | CG6593-PA | 17..327 | 149..461 | 1409 | 83.1 | Plus |
