BO21751.complete Sequence
1471 bp assembled on 2010-01-08
GenBank Submission: KX796707
> BO21751.complete
GAAGTTATCAGTCGACATGCTGTGGGAAACTATTGTGGAGGAAAACAACT
GCAGCATGGATTGCAATATCAGTAATAACACCAGCAGTTCGAGTAGCATC
AACAAAATGAGTGGATCTCGTCGTGCTCGCCGTTCCCTGGAACTGATGAG
CATGGACCAGGAGGAGCTGTCGTTCTACGACGACGACGTTGTGCCCCAGG
ATCAGCAGCGATCGGCCAGTCCGGAGCTGATGGGTCTGCTCTCGCCGGAG
GGCTCGCCCCAGCGCTTCCAGATCGTCCGCCAGCCGAAAATTCTGCCAGC
TATGGGAGTATCAAGTGATCACACGCCGGCGCGCAGCTTCCGCATCTTCA
ACAGCCTGTCCTCCACATGCTCCATGGAGTCCTCCATGGACGATGAGTAC
ATGGAGCTCTTCGAGATGGAGTCGCAGAGCCAACAGACCGCCCTGGGCTT
CCCCAGTGGCCTAAACTCGCTGATCAGCGGCCAGATCAAGGAGCAGCCTG
CTGCCAAATCGCCAGCGGGTCTGTCCATGCGCCGCCCTTCGGTCAGAAGG
TGCCTCAGCATGACGGAGAGCAACACCAACAGCACCACCACCCCACCACC
AAAGACCCCAGAGACTGCCCGGGATTGCTTCAAGCGCCCGGAACCGCCAG
CATCGGCCAACTGCTCGCCCATCCAGAGCAAACGCCATCGCTGCGCCGCC
GTTGAGAAGGAGAACTGCCCCGCACCCAGCCCACTCAGCCAGGTCACGAT
TAGCCACCCCCCTCCACTGAGGAAGTGCATGTCCCTGAACGACGCCGAGA
TCATGTCCGCCCTGGCCCGCTCCGAGAACCGCAACGAGCCCGAGCTAATC
GGCGACTTCAGCAAAGCCTATGCCCTGCCCCTGATGGAGGGTCGTCATCG
GGATCTGAAGAGCATCTCCAGCGAAACAGTGGCTCGCCTGCTTAAGGGCG
AGTTCAGCGATAAGGTGGCCAGCTACCGCATCATCGACTGCCGCTACCCC
TACGAATTCGAGGGCGGCCACATCGAGGGAGCCAAGAACCTGTACACCAC
CGAGCAGATCCTCGATGAGTTCCTCACCGTCCAACAGACTGAGCTGCAGC
AGCAGCAGAACGCCGAATCGGGACACAAGCGCAACATCATTATCTTCCAC
TGCGAATTCTCCTCGGAGCGTGGACCGAAAATGTCCCGCTTCCTGCGTAA
TCTGGATCGCGAGAGGAATACCAACGCCTATCCGGCGTTGCACTATCCCG
AGATCTATCTGCTGCACAACGGCTACAAGGAGTTCTTCGAGTCGCACGTT
GAGCTGTGCGAACCACATGCCTACCGCACCATGCTGGATCCCGCCTACAA
CGAGGCCTATCGCCACTTTCGCGCCAAGTCCAAGTCCTGGAACGGCGATG
GCCTGGGCGGTGCCACCGGGCGGCTAAAGAAGTCGCGCTCGCGACTGATG
CTGGCAAGCTTTCTAGACCAT
BO21751.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:26:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| stg-RB | 1440 | CG1395-PB | 1..1437 | 17..1453 | 7185 | 100 | Plus |
| stg-RA | 1440 | CG1395-PA | 1..1437 | 17..1453 | 7185 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:26:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| stg-RB | 2747 | CG1395-RB | 873..2309 | 17..1453 | 7185 | 100 | Plus |
| stg-RA | 2589 | CG1395-RA | 398..1834 | 17..1453 | 7185 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:26:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29252581..29253964 | 1453..70 | 6920 | 100 | Minus |
| 3R | 32079331 | 3R | 29254873..29254928 | 72..17 | 280 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:26:01 has no hits.
BO21751.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-01-08 08:57:49 Download gff for
BO21751.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| stg-RA | 853..2289 | 17..1455 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:19:17 Download gff for
BO21751.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| stg-RA | 873..2309 | 17..1455 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:29:13 Download gff for
BO21751.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| stg-RA | 398..1834 | 17..1455 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:29:13 Download gff for
BO21751.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29252579..29253961 | 73..1455 | 99 | <- | Minus |
| 3R | 29254873..29254928 | 17..72 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:19:17 Download gff for
BO21751.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25078301..25079683 | 73..1455 | 99 | <- | Minus |
| arm_3R | 25080595..25080650 | 17..72 | 100 | | Minus |
BO21751.pep Sequence
Translation from 16 to 1471
> BO21751.pep
MLWETIVEENNCSMDCNISNNTSSSSSINKMSGSRRARRSLELMSMDQEE
LSFYDDDVVPQDQQRSASPELMGLLSPEGSPQRFQIVRQPKILPAMGVSS
DHTPARSFRIFNSLSSTCSMESSMDDEYMELFEMESQSQQTALGFPSGLN
SLISGQIKEQPAAKSPAGLSMRRPSVRRCLSMTESNTNSTTTPPPKTPET
ARDCFKRPEPPASANCSPIQSKRHRCAAVEKENCPAPSPLSQVTISHPPP
LRKCMSLNDAEIMSALARSENRNEPELIGDFSKAYALPLMEGRHRDLKSI
SSETVARLLKGEFSDKVASYRIIDCRYPYEFEGGHIEGAKNLYTTEQILD
EFLTVQQTELQQQQNAESGHKRNIIIFHCEFSSERGPKMSRFLRNLDRER
NTNAYPALHYPEIYLLHNGYKEFFESHVELCEPHAYRTMLDPAYNEAYRH
FRAKSKSWNGDGLGGATGRLKKSRSRLMLASFLDH
BO21751.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:38:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| stg-PB | 479 | CG1395-PB | 1..479 | 1..479 | 2504 | 100 | Plus |
| stg-PA | 479 | CG1395-PA | 1..479 | 1..479 | 2504 | 100 | Plus |
| twe-PD | 426 | CG4965-PD | 101..425 | 107..480 | 714 | 45.1 | Plus |
| twe-PC | 426 | CG4965-PC | 101..425 | 107..480 | 714 | 45.1 | Plus |
| twe-PB | 426 | CG4965-PB | 101..425 | 107..480 | 714 | 45.1 | Plus |
