BO21759.complete Sequence
1624 bp assembled on 2010-01-06
GenBank Submission: KX794808
> BO21759.complete
GAAGTTATCAGTCGACATGGTGGGCACAACACTGAAAATGCGTGGCGATG
AGAACGCTTCGGAGAACTTCAAGCAAGTGCAATTGAAGAAATTGACGGTT
CCTTCCATGGAGGCAACAACAAAACGCGCGGCCTTGGGCGATTTGCAGAA
TCGCGGCATAAGTCGTCCCATCGCAGCGAAGGATGCGGCACAGAAAGACT
CCAAGGATCTCAAGCTCACAGACGCCCTGCGCAATGCCAAAGCTCGGGTG
GACAGCCACTGGAAGAAACAGCCACTGGGCAGCACCAATGGCAATGGCAA
TGGCGCCGTTCCGCCCAAGGTCAACGAGGGGGGCGTGTCGGCGTTTTTGC
GTTCGAATTCGGTGCGCAATCGCGTTCCGACCAAGACCACTGTAGAACCC
ACTAAAGTTACAGTCAAGTCCAGTTCTTCCGAGAACGTGAACGAGCCCAC
CTTAAAGCGCGAGGACAGCAATCTGTCGAAGAAGTCGCTGACCAAACTGC
GTGCCGCTTTGGCCAAACCCGTGATGGGAGTTTCAGGAATTCGACGGGAA
CCAGTAGCTGTTTCCCGCAAAGAGGCAGAGACCAAGAAGGAACTGCCAGA
AACCAAGAAGGACTCACTGGAAGTGAAAAAGGATGCGACCAGGATGCCCC
TTATTAGGGGCAACAGTGCAGTCACTACGACCACATCTACGATGCCCACC
ACCATGTCCCTTTCCAGCAAGCGCTTGGCTGGAATCGAGGACATTGATGC
CAATGACAAGGAGAACCTGGTACTGGTCTCCGAATATGTAAACGACATCT
ACGACTACTTGTATCAGGTGGAGCTGGAGCAGCCCATTCACAAGGATCAC
CTGGCCGGACAGAAGGAGGTGTCCCACAAGATGCGAGCCGTGCTGATCGA
TTGGATCAACGAAGTCCACCTGCAGTTCCATCTGGCTGCAGAGACCTTCC
AGCTGGCGGTGGCTATCATTGATCGCTACCTGCAGGTGGTCAAGGACACC
AAACGCACGTACTTGCAATTGGTGGGAGTGACAGCACTCTTCATAGCCAC
CAAGTACGAGGAGCTGTTCCCGCCGGCAATCGGAGATTTCGTCTTCATCA
CGGACGACACCTACACTGCCCGGCAGATCCGACAGATGGAGCTGCAAATC
TTCAAGGCCATCGACTGTAATCTGTCGCGTCCGCTGCCGATTCACTTCCT
TCGACGCTACTCGAAGGCTGCTGGCGCCGAGGACGAGCACCATACGATGT
CCAAGTACTTCATCGAGTTAGCTTCCGTGGACTACGAAATGGCCACTTAC
AGGCCATCGGAGATTGCAGCTGCCTCACTGTTCCTGTCGCTGCACTTGCT
CAATGGAAACCACCGGGCCGGTACAGGATTCAACGACCGTCACTGGACGC
CCACTCTGACCTTCTACTCGCGATACTCGGCCGCGCACTTGCGTCCGATT
ACCCGGCTGATCGCGAAACTGGCCCGGGACGCTCCTCAGGCCAAGCTGAA
GGCCATCTACAACAAGTACCAGGGCAGCAAGTTCCAGAAGATCGCGCTGC
GAACGGAGCTGACCGGTGCGCTGATGGACTCGATTGTGGGCCAGAGCCAG
AGGAAAGCAAGCTTTCTAGACCAT
BO21759.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:19:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CycB-RA | 1593 | CG3510-PA | 1..1590 | 17..1606 | 7950 | 100 | Plus |
| CycB-RE | 1587 | CG3510-PE | 1..1584 | 17..1606 | 7825 | 99.6 | Plus |
| CycB-RB | 1575 | CG3510-PB | 17..1572 | 51..1606 | 7780 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:19:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CycB-RA | 2633 | CG3510-RA | 268..1857 | 17..1606 | 7950 | 100 | Plus |
| CycB-RE | 2627 | CG3510-RE | 268..1851 | 17..1606 | 7825 | 99.6 | Plus |
| CycB-RC | 2548 | CG3510-RC | 217..1772 | 51..1606 | 7780 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:19:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22804660..22805568 | 1312..404 | 4545 | 100 | Minus |
| 2R | 25286936 | 2R | 22804297..22804592 | 1606..1311 | 1480 | 100 | Minus |
| 2R | 25286936 | 2R | 22805667..22805875 | 407..199 | 1045 | 100 | Minus |
| 2R | 25286936 | 2R | 22805940..22806087 | 198..51 | 740 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:19:45 has no hits.
BO21759.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-01-06 09:26:11 Download gff for
BO21759.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycB-RA | 305..1894 | 17..1608 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:16:43 Download gff for
BO21759.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycB-RA | 268..1857 | 17..1608 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:26:54 Download gff for
BO21759.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycB-RA | 268..1857 | 17..1608 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:26:54 Download gff for
BO21759.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22804295..22804590 | 1313..1608 | 99 | <- | Minus |
| 2R | 22804660..22805564 | 408..1312 | 100 | <- | Minus |
| 2R | 22805667..22805875 | 199..407 | 100 | <- | Minus |
| 2R | 22805940..22806085 | 53..198 | 100 | <- | Minus |
| 2R | 22806646..22806681 | 17..52 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:16:43 Download gff for
BO21759.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18692165..18693069 | 408..1312 | 100 | <- | Minus |
| arm_2R | 18691800..18692095 | 1313..1608 | 99 | <- | Minus |
| arm_2R | 18693172..18693380 | 199..407 | 100 | <- | Minus |
| arm_2R | 18693445..18693590 | 53..198 | 100 | <- | Minus |
| arm_2R | 18694151..18694186 | 17..52 | 100 | | Minus |
BO21759.pep Sequence
Translation from 16 to 1624
> BO21759.pep
MVGTTLKMRGDENASENFKQVQLKKLTVPSMEATTKRAALGDLQNRGISR
PIAAKDAAQKDSKDLKLTDALRNAKARVDSHWKKQPLGSTNGNGNGAVPP
KVNEGGVSAFLRSNSVRNRVPTKTTVEPTKVTVKSSSSENVNEPTLKRED
SNLSKKSLTKLRAALAKPVMGVSGIRREPVAVSRKEAETKKELPETKKDS
LEVKKDATRMPLIRGNSAVTTTTSTMPTTMSLSSKRLAGIEDIDANDKEN
LVLVSEYVNDIYDYLYQVELEQPIHKDHLAGQKEVSHKMRAVLIDWINEV
HLQFHLAAETFQLAVAIIDRYLQVVKDTKRTYLQLVGVTALFIATKYEEL
FPPAIGDFVFITDDTYTARQIRQMELQIFKAIDCNLSRPLPIHFLRRYSK
AAGAEDEHHTMSKYFIELASVDYEMATYRPSEIAAASLFLSLHLLNGNHR
AGTGFNDRHWTPTLTFYSRYSAAHLRPITRLIAKLARDAPQAKLKAIYNK
YQGSKFQKIALRTELTGALMDSIVGQSQRKASFLDH
BO21759.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:03:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CycB-PA | 530 | CG3510-PA | 1..530 | 1..530 | 2676 | 100 | Plus |
| CycB-PE | 528 | CG3510-PE | 1..528 | 1..530 | 2654 | 99.6 | Plus |
| CycB-PB | 524 | CG3510-PB | 5..524 | 11..530 | 2618 | 99.6 | Plus |
| CycB-PC | 500 | CG3510-PC | 1..500 | 31..530 | 2527 | 100 | Plus |
| CycB3-PB | 575 | CG5814-PB | 288..552 | 240..510 | 405 | 36.1 | Plus |
