BO21771.complete Sequence
1861 bp assembled on 2010-01-08
GenBank Submission: KX797840
> BO21771.complete
GAAGTTATCAGTCGACATGGCATTCCGCCAGTCGGAGCACGAGATGAGCG
TCACCTCACTCGATTCAAGCGTCGAACTGAGATCGCGTTCGCCATCGCCG
CAGGTCTTCAATCCGCGCAAGCTCCGCTTCGCCGATGATGACTTTGACAA
GGACACGCCCGAGGGAGCGAGTCCGCAGCATCCCCTTCAGCAGCGGCCGA
AGCTATCCTCCGGTGAGGAGCAGCAGCTGGACAGTAAGATAGGCAAAGAA
GGCGGCGACGGGGACGTGTCCATGTCGCCGCCATGCCAAAAGGTGCGGGC
CCTGCGACTCTTTAGCACACCGGCCACTCCAAAGACCATCCTGCAGAAGT
CGACGACGCAGTGCAGCAACCATCTGTCGGCGGCAGCAGCGGCAGTGAAT
GCCTCCAGGCGCAGCGACGACCTCTTCCGCCTGTCAGAGCGCCCGCGATC
TCTGCCACTGCACAACCGCAAACTGCCCACCCAGGACACGGCAAATGTGA
ACCCCTTCACGCCAGATAGCCTCATGGCTCACAATAAGAAGCGCTGTCGC
ACGCAATTCGGACGCGAAAACCTCAACCTGAACGTGAATGCTATGCAAAA
GTATTTGCTCAGTGATGCCTGCGACGACGATGTGACGGAGGAGGCGGGCG
ACTCGATGCGCGAAATCCACCAGCAGGCACCCAAGCGGCTGGCCCTGCAC
GACACGAACATCAGTCGCTTCAAGCGGGAGTTCATGCAAGTCAACGTAAT
CGGCGTTGGCGAGTTCGGTGTGGTGTTCCAATGCGTCAATCGACTAGATG
GCTGCATATATGCGATTAAAAAGAGTAAGAAGCCGGTGGCAGGCAGTTCT
TTCGAAAAGAGAGCCCTGAACGAGGTCTGGGCCCATGCTGTATTGGGCAA
GCACGATAACGTGGTTAGATACTATTCCGCGTGGGCGGAGGACGATCATA
TGCTGATACAGAATGAATTCTGCGATGGTGGCAGCTTGCACGCGCGCATC
CAAGATCATTGTTTGGGTGAGGCAGAGCTAAAGATTGTTCTCATGCATGT
GATAGAGGGCCTACGCTATATTCATTCAAATGACCTGGTGCACATGGATC
TGAAGCCCGAAAACATATTCTCCACCATGAATCCCAATGCACACAAGCTG
GTGGAGGTGCAGCCGCAGCAGACCAAAGATGACGATGGCATGGACAGCGT
CTATGAAGAACTGCGCCATTCAGAGAATCTGGTTACGTACAAGATCGGCG
ACCTGGGACACGTGACCTCCGTTAAGGAACCCTACGTCGAGGAGGGAGAC
TGTCGTTACCTGCCCAAGGAGATCCTTCACGAGGATTATTCGAATCTCTT
CAAGGCCGACATATTTTCCCTGGGCATCACGCTGTTCGAGGCGGCCGGCG
GTGGTCCGCTGCCTAAAAATGGACCCGAATGGCACAACTTGCGAGATGGC
AAGGTGCCGATTCTGCCGAGCCTGAGCAGGGATTTTAACGAGCTCATAGC
CCAGATGATGCATCCTTATCCCGACAAGAGGCCCACTTCGCAGTCTATAT
TCAGTCATCCAATTCTGAGTGCTGTTGACTCCAAGAGCAAGCTGCAGCTC
GGCCTGGAGCTGACCGTGGAGAAGCGCAAGAACGAGATACTGATGAACAA
GCTGAGAGAGGCAAAAAAACAGATTAAACTGCTCGAGCAACGAGTCAATC
TTCTTGCGGTGACTAACAATCCGGACAGTCTGGATGGACAGCGTTGCCTT
CGCAGCTTCACGCGACGCATGCGCACGCCATTCTCCAGCCATGGCAAGTT
CGACAGCATATCCGATCGCAACAAGAACGTTATCACCAATATCGCAAGCT
TTCTAGACCAT
BO21771.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:26:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wee1-RB | 1830 | CG4488-PB | 1..1827 | 17..1843 | 9120 | 99.9 | Plus |
| Wee1-RA | 1830 | CG4488-PA | 1..1827 | 17..1843 | 9120 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:26:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wee1-RB | 2652 | CG4488-RB | 212..2038 | 17..1843 | 9120 | 99.9 | Plus |
| Wee1-RA | 2399 | CG4488-RA | 212..2038 | 17..1843 | 9120 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:26:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6912184..6912888 | 1560..856 | 3525 | 100 | Minus |
| 2L | 23513712 | 2L | 6913425..6913927 | 519..17 | 2515 | 100 | Minus |
| 2L | 23513712 | 2L | 6912945..6913281 | 855..519 | 1685 | 100 | Minus |
| 2L | 23513712 | 2L | 6911704..6911854 | 1843..1693 | 755 | 100 | Minus |
| 2L | 23513712 | 2L | 6911949..6912082 | 1694..1561 | 655 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:26:56 has no hits.
BO21771.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-01-08 08:57:55 Download gff for
BO21771.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wee-RA | 211..2037 | 17..1845 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:19:40 Download gff for
BO21771.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wee-RA | 212..2038 | 17..1845 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:29:31 Download gff for
BO21771.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wee1-RA | 212..2038 | 17..1845 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:29:31 Download gff for
BO21771.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6911701..6911852 | 1695..1845 | 98 | <- | Minus |
| 2L | 6911949..6912082 | 1561..1694 | 99 | <- | Minus |
| 2L | 6912184..6912888 | 856..1560 | 100 | <- | Minus |
| 2L | 6912945..6913281 | 519..855 | 100 | <- | Minus |
| 2L | 6913426..6913927 | 17..518 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:19:40 Download gff for
BO21771.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6911701..6911852 | 1695..1845 | 98 | <- | Minus |
| arm_2L | 6911949..6912082 | 1561..1694 | 99 | <- | Minus |
| arm_2L | 6912184..6912888 | 856..1560 | 100 | <- | Minus |
| arm_2L | 6912945..6913281 | 519..855 | 100 | <- | Minus |
| arm_2L | 6913426..6913927 | 17..518 | 100 | | Minus |
BO21771.pep Sequence
Translation from 16 to 1861
> BO21771.pep
MAFRQSEHEMSVTSLDSSVELRSRSPSPQVFNPRKLRFADDDFDKDTPEG
ASPQHPLQQRPKLSSGEEQQLDSKIGKEGGDGDVSMSPPCQKVRALRLFS
TPATPKTILQKSTTQCSNHLSAAAAAVNASRRSDDLFRLSERPRSLPLHN
RKLPTQDTANVNPFTPDSLMAHNKKRCRTQFGRENLNLNVNAMQKYLLSD
ACDDDVTEEAGDSMREIHQQAPKRLALHDTNISRFKREFMQVNVIGVGEF
GVVFQCVNRLDGCIYAIKKSKKPVAGSSFEKRALNEVWAHAVLGKHDNVV
RYYSAWAEDDHMLIQNEFCDGGSLHARIQDHCLGEAELKIVLMHVIEGLR
YIHSNDLVHMDLKPENIFSTMNPNAHKLVEVQPQQTKDDDGMDSVYEELR
HSENLVTYKIGDLGHVTSVKEPYVEEGDCRYLPKEILHEDYSNLFKADIF
SLGITLFEAAGGGPLPKNGPEWHNLRDGKVPILPSLSRDFNELIAQMMHP
YPDKRPTSQSIFSHPILSAVDSKSKLQLGLELTVEKRKNEILMNKLREAK
KQIKLLEQRVNLLAVTNNPDSLDGQRCLRSFTRRMRTPFSSHGKFDSISD
RNKNVITNIASFLDH
BO21771.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:38:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wee1-PB | 609 | CG4488-PB | 1..609 | 1..609 | 3184 | 100 | Plus |
| Wee1-PA | 609 | CG4488-PA | 1..609 | 1..609 | 3184 | 100 | Plus |
| Myt1-PA | 533 | CG32417-PA | 72..359 | 209..525 | 389 | 30.7 | Plus |
| S6kII-PB | 911 | CG17596-PB | 564..869 | 235..543 | 183 | 24.9 | Plus |
| S6kII-PA | 911 | CG17596-PA | 564..869 | 235..543 | 183 | 24.9 | Plus |
