BO21809.complete Sequence
577 bp assembled on 2009-12-07
> BO21809.complete
GAAGTTATCAGTCGACATGTATGTTCATGCGATTTATGAACATATGTTTA
GCCATTTGGCCGCTTTTGGCCAACTGTGCTTCGTGTTGGCTCCTGGGGAA
AGTGCAACATTTGCGACTCCATTAACGGGTACACTCACTAACGCCCTTCG
GTTGCATCTCCCTCACAGGCGCAATGGAGCCTCCAGCACAGCCTCCGAGC
CGCTGCGTCCCAATCTGGATGGCAGCCACCATCTGCAGGAGTACACCTAC
AAGAAGATAACGGCCTGCGACGTCTGCTCCCAGATTCTGAGAGGGCACAC
ACGCCAGGGATTACGCTGCCGCATCTGCAAGCTGAACGCCCATGGAGATT
GCGCCCCCAATCTGCCGCGCTGCCAGCCAAAGCAGAAGCTGCTCCGGCGA
CAGAAGAGCACATCGGAGCTGGAGAATCGTGTTGATATCGAGGAAGAAAC
GTCAGCGAATCCGAAGTCCGAAACAACGCGACCCTTTGGCGAACCACTGA
TGCTCCTCAAGAGCACGGAATCCAATCCGGATGAGTCCAAGGGCAATCGA
CGAGTGCGCGCAAGCTTTCTAGACCAT
BO21809.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:18:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43729-RN | 1677 | CG43729-PN | 1282..1674 | 167..559 | 1965 | 100 | Plus |
CG43729-RM | 654 | CG43729-PM | 259..651 | 167..559 | 1965 | 100 | Plus |
CG43729-RC | 468 | CG43729-PC | 73..465 | 167..559 | 1965 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:18:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43729-RN | 4584 | CG43729-RN | 3753..4145 | 167..559 | 1965 | 100 | Plus |
CG43729-RM | 2382 | CG43729-RM | 1551..1943 | 167..559 | 1965 | 100 | Plus |
CG43729-RC | 1842 | CG43729-RC | 1011..1403 | 167..559 | 1965 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:18:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 15456283..15456560 | 17..294 | 1390 | 100 | Plus |
2R | 25286936 | 2R | 15456658..15456815 | 292..449 | 790 | 100 | Plus |
2R | 25286936 | 2R | 15463298..15463407 | 450..559 | 550 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:18:47 has no hits.
BO21809.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:38:21 Download gff for
BO21809.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34365-RE | 13..555 | 17..561 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:14 Download gff for
BO21809.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43729-RB | 5355..5747 | 167..561 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:10:46 Download gff for
BO21809.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43729-RC | 1011..1403 | 167..561 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:10:46 Download gff for
BO21809.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15456283..15456559 | 17..293 | 100 | -> | Plus |
2R | 15456660..15456815 | 294..449 | 100 | -> | Plus |
2R | 15463298..15463407 | 450..561 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:14 Download gff for
BO21809.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 11343788..11344064 | 17..293 | 100 | -> | Plus |
arm_2R | 11344165..11344320 | 294..449 | 100 | -> | Plus |
arm_2R | 11350803..11350912 | 450..561 | 98 | | Plus |
BO21809.pep Sequence
Translation from 16 to 577
> BO21809.pep
MYVHAIYEHMFSHLAAFGQLCFVLAPGESATFATPLTGTLTNALRLHLPH
RRNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILRGHTRQGLR
CRICKLNAHGDCAPNLPRCQPKQKLLRRQKSTSELENRVDIEEETSANPK
SETTRPFGEPLMLLKSTESNPDESKGNRRVRASFLDH
BO21809.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:06:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43729-PC | 155 | CG43729-PC | 25..155 | 51..181 | 696 | 100 | Plus |
CG43729-PM | 217 | CG43729-PM | 87..217 | 51..181 | 696 | 100 | Plus |
CG43729-PN | 558 | CG43729-PN | 428..558 | 51..181 | 696 | 100 | Plus |
CG43729-PA | 818 | CG43729-PA | 688..818 | 51..181 | 696 | 100 | Plus |
CG43729-PT | 877 | CG43729-PT | 688..877 | 51..181 | 573 | 65.3 | Plus |