BO21811.complete Sequence
646 bp assembled on 2009-12-07
GenBank Submission: KX796710
> BO21811.complete
GAAGTTATCAGTCGACATGGAACTCCTCAACGAATCTGCTCCGAATCCGC
TTGCCAAGACGCCGAAAAGTGGCATGTCCACGGGCGGCAAGATCCTGATA
GCAGCAACGGGCGGAGTAGGTATCGGTCTGTCGATTGTGTGCGCCTCCTT
TGTGGCGCCTGCATTCCGGAGGATTTGCTTGCCTTATGTGCCAGCGACGA
CCGAGCAAATACAGAACGTTCTCAGCTTCCTGCCCAAGAATTCGGCCGGA
AAACTGCTGGACATTGGATCCGGCGACGGACGGATTGTAGTGGCTGCGGC
ACAGCATTGTGGTGCTCTAAAAGCAGATGGCGTGGAGCTAAACCCATGGC
TGGTCTACTACTCGCGCCTGGCCGCGCTGCGTCACAGCGTTTCCAAACGG
ACGAGATTTTTTCGGCGAGATCTCTGGAAGTTCGATATAAAGGACTACAA
CTTCGTGGTCATTTTTGGGGTTGAGCAGATGATGCAAGATCTAGAACACA
AACTCATTGCTGAGTGTCCGCACAACACCAAGATTATCGCCTGCCGCTTT
CCACTACCCAGCCTAGAGCACGTGAAGATTATAGAGGACGGAGTAAACAC
CGTCTGGTTCTACGACCTGAACAAAAGCGCAAGCTTTCTAGACCAT
BO21811.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:18:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3337-RB | 615 | CG3337-PB | 1..612 | 17..628 | 3060 | 100 | Plus |
| CG3337-RA | 615 | CG3337-PA | 1..612 | 17..628 | 3060 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:19:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3337-RB | 2819 | CG3337-RB | 52..663 | 17..628 | 3060 | 100 | Plus |
| CG3337-RA | 708 | CG3337-RA | 52..663 | 17..628 | 3060 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:18:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21222860..21223195 | 628..293 | 1680 | 100 | Minus |
| 3R | 32079331 | 3R | 21223257..21223533 | 293..17 | 1385 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:18:58 has no hits.
BO21811.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:38:23 Download gff for
BO21811.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3337-RA | 1..612 | 17..630 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:19 Download gff for
BO21811.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3337-RA | 52..663 | 17..630 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:10:49 Download gff for
BO21811.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3337-RA | 52..663 | 17..630 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:10:49 Download gff for
BO21811.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21222856..21223194 | 294..630 | 99 | <- | Minus |
| 3R | 21223257..21223533 | 17..293 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:19 Download gff for
BO21811.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17048578..17048916 | 294..630 | 99 | <- | Minus |
| arm_3R | 17048979..17049255 | 17..293 | 100 | | Minus |
BO21811.pep Sequence
Translation from 16 to 646
> BO21811.pep
MELLNESAPNPLAKTPKSGMSTGGKILIAATGGVGIGLSIVCASFVAPAF
RRICLPYVPATTEQIQNVLSFLPKNSAGKLLDIGSGDGRIVVAAAQHCGA
LKADGVELNPWLVYYSRLAALRHSVSKRTRFFRRDLWKFDIKDYNFVVIF
GVEQMMQDLEHKLIAECPHNTKIIACRFPLPSLEHVKIIEDGVNTVWFYD
LNKSASFLDH
BO21811.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:06:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3337-PB | 204 | CG3337-PB | 1..204 | 1..204 | 1065 | 100 | Plus |
| CG3337-PA | 204 | CG3337-PA | 1..204 | 1..204 | 1065 | 100 | Plus |
