BO21817.complete Sequence
796 bp assembled on 2009-12-07
GenBank Submission: KX799121
> BO21817.complete
GAAGTTATCAGTCGACATGGCGGATGGTGGGCATTCATTCGTGAAGAAGA
CATTTCATAAGCCAACATACTGTCACCACTGCTCGGATCTGCTCTGGGGC
CTCATCCAGCAGGGATATATCTGCGAAGTTTGCAACTTTATCATTCACGA
ACGATGTGTCAGCAGCGTGGTAACGCCCTGTTCCGGCATCGCTCCATGTA
TTATAAAGAATCCCGTTGCCCATTGTTGGTCCGAGCCAACTCATCACAAG
AGAAAATTCTGCACAGTTTGCCGTAAGCGATTGGATGAAACGCCAGCGGT
GCATTGTTTAGTCTGCGAATATTTCGCGCATATTGAGTGCCAAGATTTTG
CCGTGCCCGATTGCACCGAGAATGCCACGTATGTGCCAGGCAAGGAGCTG
CTTAATGTGAAGCATCAGCATCACTGGCGAGAGGGCAATCTTCCATCAAC
GTCCAAATGCGCTTACTGCAAGAAAACCTGTTGGTCCTCGGAATGTCTCA
CTGGCTATCGTTGCGAGTGGTGTGGCATGACGACCCATGCCGGATGTCGC
ATGTACCTGCCAACCGAATGTAATTTTGGTATTCTACAACCTATCTACTT
ACCTCCGCACTCAGTCTCGATTCCGCGCACCGAGGTGCCCATCGAGGCCA
TCATCGGCGTCCAGGTCAAATCGAAGACTTCGCTCGTGCGCGACTACTCG
TGTCGTAAGTACAGAGTCCTGATCCGGCAGGATATGCTGGCATTTCAGAT
TTATCTGGCCCTATCAAAACCAAAATCCGCAAGCTTTCTAGACCAT
BO21817.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:55:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31140-RE | 765 | CG31140-PE | 1..762 | 17..778 | 3810 | 100 | Plus |
| CG31140-RG | 4497 | CG31140-PG | 1..688 | 17..704 | 3440 | 100 | Plus |
| CG31140-RF | 3081 | CG31140-PF | 1..688 | 17..704 | 3440 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:55:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31140-RE | 1811 | CG31140-RE | 836..1597 | 17..778 | 3810 | 100 | Plus |
| CG31140-RG | 6647 | CG31140-RG | 824..1511 | 17..704 | 3440 | 100 | Plus |
| CG31140-RF | 4144 | CG31140-RF | 846..1533 | 17..704 | 3440 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:55:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23973353..23973628 | 503..778 | 1380 | 100 | Plus |
| 3R | 32079331 | 3R | 23966591..23966702 | 17..128 | 560 | 100 | Plus |
| 3R | 32079331 | 3R | 23973033..23973141 | 310..418 | 545 | 100 | Plus |
| 3R | 32079331 | 3R | 23972607..23972711 | 207..311 | 525 | 100 | Plus |
| 3R | 32079331 | 3R | 23973205..23973293 | 416..504 | 445 | 100 | Plus |
| 3R | 32079331 | 3R | 23972446..23972527 | 127..208 | 410 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:55:12 has no hits.
BO21817.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:38:33 Download gff for
BO21817.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31140-RE | 832..1593 | 17..780 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:14:07 Download gff for
BO21817.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31140-RE | 836..1597 | 17..780 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:28:40 Download gff for
BO21817.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31140-RE | 836..1597 | 17..780 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:28:40 Download gff for
BO21817.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23966591..23966702 | 17..128 | 100 | -> | Plus |
| 3R | 23972448..23972527 | 129..208 | 100 | -> | Plus |
| 3R | 23972609..23972711 | 209..311 | 100 | -> | Plus |
| 3R | 23973035..23973141 | 312..418 | 100 | -> | Plus |
| 3R | 23973208..23973292 | 419..503 | 100 | -> | Plus |
| 3R | 23973354..23973628 | 504..780 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:14:07 Download gff for
BO21817.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19792313..19792424 | 17..128 | 100 | -> | Plus |
| arm_3R | 19798170..19798249 | 129..208 | 100 | -> | Plus |
| arm_3R | 19798331..19798433 | 209..311 | 100 | -> | Plus |
| arm_3R | 19798757..19798863 | 312..418 | 100 | -> | Plus |
| arm_3R | 19798930..19799014 | 419..503 | 100 | -> | Plus |
| arm_3R | 19799076..19799350 | 504..780 | 99 | | Plus |
BO21817.pep Sequence
Translation from 16 to 796
> BO21817.pep
MADGGHSFVKKTFHKPTYCHHCSDLLWGLIQQGYICEVCNFIIHERCVSS
VVTPCSGIAPCIIKNPVAHCWSEPTHHKRKFCTVCRKRLDETPAVHCLVC
EYFAHIECQDFAVPDCTENATYVPGKELLNVKHQHHWREGNLPSTSKCAY
CKKTCWSSECLTGYRCEWCGMTTHAGCRMYLPTECNFGILQPIYLPPHSV
SIPRTEVPIEAIIGVQVKSKTSLVRDYSCRKYRVLIRQDMLAFQIYLALS
KPKSASFLDH
BO21817.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:07:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31140-PE | 254 | CG31140-PE | 1..254 | 1..254 | 1444 | 100 | Plus |
| CG31140-PF | 1026 | CG31140-PF | 1..229 | 1..229 | 1322 | 100 | Plus |
| CG31140-PB | 1055 | CG31140-PB | 1..229 | 1..229 | 1322 | 100 | Plus |
| CG31140-PG | 1498 | CG31140-PG | 1..229 | 1..229 | 1322 | 100 | Plus |
| CG31140-PD | 1555 | CG31140-PD | 1..229 | 1..229 | 1322 | 100 | Plus |
