BO21821.complete Sequence
886 bp assembled on 2009-12-07
GenBank Submission: KX797312
> BO21821.complete
GAAGTTATCAGTCGACATGGCAGCCAGTAAGTCCCAGATCGAGGAGCTGT
ACGACTTTATCTATCCGCTCGCAGTGAGAGCTGGGGAAATCCTGTTGGAA
GGCTATCAAAATGCTGGCAAGGCGGTGGCCCTCAAGGACGGGGAGTTCTA
TAATGTAGTCACTGCCTATGATAACCAGATAGAGGAGTTTCTCGTGGAGA
AAATACTGGCGCGCTACCCGGATCACAAATTCATTGGGGAAGAGGATACC
CACAAGAATGACAATGTAACGAAAGAGCTGACGGATGCTCCAACTTGGAT
CATAGATCCCATCGATGGAACCTCGAACTTTATCAAACAAATTCCACATG
TCTCGGTTTCAATTGGATTGTCCATTAAGAAACAGATCGTGCTGGGTGTA
GTTAACAATCCCGCACAGAATAAGTTATATACCGCGAAATTGGGCCAGGG
TGCCTTTTGCAATGGGAAACCAATTCAGGTGAGCAGCTGTGAACATCTCA
ACGATGCTAATGTGGCATACGAGGTTTGCTTGCTGCACGCTCCAAAGATC
CGGAACAAGCACATCAAAAGAATCTACCATGTGGGATCCAATGCCAGAAG
ACTCCTGGCATATTCCGCTGTAGTGGATTCCCTTTGCATGGTGGCCGCAG
GCAACTTGGATGCCTTTCATATTGAAGACATGTATCCCTGGGATTGTGCA
GCTGGCTATTTGCTCATCCGTGAGGCCGGCGGAGTTGTCACGCATCCCTA
CGGCGGACCCTTCGATATCATGAAGCCAGATCTAATCTGCGCCGGAACGG
AGACACTGAGAGCTGAGATAGAGCATCTTATTCGGAAGGCTGATCAGGAG
AAGCATGTGGGAGGAGAGGCAAGCTTTCTAGACCAT
BO21821.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:09:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17026-RA | 855 | CG17026-PA | 1..852 | 17..868 | 4260 | 100 | Plus |
CG17027-RB | 867 | CG17027-PB | 142..787 | 158..803 | 1070 | 77.7 | Plus |
CG17027-RA | 867 | CG17027-PA | 142..787 | 158..803 | 1070 | 77.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:09:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17026-RA | 1004 | CG17026-RA | 91..942 | 17..868 | 4260 | 100 | Plus |
CG17027-RB | 1558 | CG17027-RB | 412..1057 | 158..803 | 1070 | 77.7 | Plus |
CG17027-RA | 1362 | CG17027-RA | 216..861 | 158..803 | 1070 | 77.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:09:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15975458..15976041 | 17..600 | 2920 | 100 | Plus |
3L | 28110227 | 3L | 15976097..15976366 | 599..868 | 1350 | 100 | Plus |
3L | 28110227 | 3L | 15980511..15980951 | 158..598 | 735 | 77.8 | Plus |
3L | 28110227 | 3L | 15981203..15981387 | 619..803 | 355 | 79.5 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:09:44 has no hits.
BO21821.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:38:32 Download gff for
BO21821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17026-RA | 1..852 | 17..870 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:07:19 Download gff for
BO21821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17026-RA | 91..942 | 17..870 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:04:35 Download gff for
BO21821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17026-RA | 91..942 | 17..870 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:04:35 Download gff for
BO21821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15975458..15976041 | 17..600 | 100 | -> | Plus |
3L | 15976099..15976366 | 601..870 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:07:19 Download gff for
BO21821.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15968558..15969141 | 17..600 | 100 | -> | Plus |
arm_3L | 15969199..15969466 | 601..870 | 99 | | Plus |
BO21821.pep Sequence
Translation from 16 to 886
> BO21821.pep
MAASKSQIEELYDFIYPLAVRAGEILLEGYQNAGKAVALKDGEFYNVVTA
YDNQIEEFLVEKILARYPDHKFIGEEDTHKNDNVTKELTDAPTWIIDPID
GTSNFIKQIPHVSVSIGLSIKKQIVLGVVNNPAQNKLYTAKLGQGAFCNG
KPIQVSSCEHLNDANVAYEVCLLHAPKIRNKHIKRIYHVGSNARRLLAYS
AVVDSLCMVAAGNLDAFHIEDMYPWDCAAGYLLIREAGGVVTHPYGGPFD
IMKPDLICAGTETLRAEIEHLIRKADQEKHVGGEASFLDH
BO21821.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:07:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17026-PA | 284 | CG17026-PA | 1..284 | 1..284 | 1492 | 100 | Plus |
CG17027-PB | 288 | CG17027-PB | 5..284 | 4..284 | 1170 | 77.6 | Plus |
CG17027-PA | 288 | CG17027-PA | 5..284 | 4..284 | 1170 | 77.6 | Plus |
CG17029-PB | 284 | CG17029-PB | 4..277 | 2..277 | 675 | 45.3 | Plus |
CG17029-PA | 284 | CG17029-PA | 4..277 | 2..277 | 675 | 45.3 | Plus |