BO21829.complete Sequence
1009 bp assembled on 2012-04-24
GenBank Submission: KX797094
> BO21829.complete
GAAGTTATCAGTCGACATGAATAACTCCAAACGCTCGCGACTCAGCGACA
AGGATGAAGGTCCGTGCAAAATTCGAAAAGCGACCAACCTGTCGGATAAG
AAGGCAATCGTAGATCTATTCTCTAGTTTCGTGAATACACATCATTTTCG
ACCCAACCCCGATGGTCAGAGGATTGATAAAATAATTGTAATAAAGTTAG
TGGAACGCTTAGAAACTACAGATGTAAATGATCGCAAATTTATGCAGAGT
ATATTGCGGCGCGTCTATTTAAAGTGCACCGACTTGCGTCTATTTATTCG
AAATCAGCTCAACGATGTATTCTTTCGATTGATTTTCGAAGGAACTGACT
TTCATTGCATCCCAGAAATTCTGGAAATTTACTATGATATAATCAAGGGA
TTTACTCAACCATATGAGACTGAACATGAGCAACTGCTCTTTAAGATCCT
TTTGCCTTTGCACAAGCCGCCATCGTTAACAAAGTATTTTCATCAGCTGA
TAAAATGCATTATTGCATTCCTTAACCAATATCCATCTTTCATTGAAAAA
TATGTCAAAGGTCTTCTACGGCTCTGGCCGAAGACGTCCTTTACTAAGGT
GACATTGTTTCTAAGCGAGATTGCCAGAATTTTGGTAATAAAAAATGAGC
AAGAGGTCAAGAAAGTCATGCTGACGATTTTTAATCATATTGCAAAATGT
CTGTGTGATGAAAGCAATAAGATAGCCGAGCACACTCTTCTTTTGTGGAA
AAACAATGCGGTTTTGGAGGTTATACATCGAAACCACGCGCTCATCATGC
CCATTGTATATCCACACGTATTACGCGTATTGATACGTCATTATATGAGA
AAACCAATGCAAACGAATGCCTCCATTGCTTTATGTACTTTACTAAAAAT
GAACAATCCGATGCTTAGATGCCTGACTACTGTATGCATGAGCACCGATC
ATAGACCGATGAAACACGACGCCGAGAATTCTATACCTAAGGCAAGCTTT
CTAGACCAT
BO21829.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:39:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32568-RC | 978 | CG32568-PC | 1..975 | 17..991 | 4875 | 100 | Plus |
CG32568-RB | 978 | CG32568-PB | 1..975 | 17..991 | 4875 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:39:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32568-RC | 1818 | CG32568-RC | 99..1073 | 17..991 | 4875 | 100 | Plus |
CG32568-RB | 1539 | CG32568-RB | 99..1073 | 17..991 | 4875 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:39:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 16741524..16741857 | 388..721 | 1670 | 100 | Plus |
X | 23542271 | X | 16741902..16742173 | 720..991 | 1360 | 100 | Plus |
X | 23542271 | X | 16741237..16741429 | 195..387 | 965 | 100 | Plus |
X | 23542271 | X | 16741004..16741183 | 17..196 | 900 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:39:04 has no hits.
BO21829.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-10-06 12:06:43 Download gff for
BO21829.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32568-RA | 69..1034 | 17..993 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:01:34 Download gff for
BO21829.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32568-RB | 99..1073 | 17..993 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:49 Download gff for
BO21829.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32568-RB | 99..1073 | 17..993 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:15:35 Download gff for
BO21829.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32568-RB | 99..1073 | 17..993 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:15:35 Download gff for
BO21829.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 16741004..16741183 | 17..196 | 100 | -> | Plus |
X | 16741239..16741429 | 197..387 | 100 | -> | Plus |
X | 16741524..16741857 | 388..721 | 100 | -> | Plus |
X | 16741904..16742173 | 722..993 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:49 Download gff for
BO21829.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 16635037..16635216 | 17..196 | 100 | -> | Plus |
arm_X | 16635272..16635462 | 197..387 | 100 | -> | Plus |
arm_X | 16635557..16635890 | 388..721 | 100 | -> | Plus |
arm_X | 16635937..16636206 | 722..993 | 99 | | Plus |
BO21829.pep Sequence
Translation from 16 to 1009
> BO21829.pep
MNNSKRSRLSDKDEGPCKIRKATNLSDKKAIVDLFSSFVNTHHFRPNPDG
QRIDKIIVIKLVERLETTDVNDRKFMQSILRRVYLKCTDLRLFIRNQLND
VFFRLIFEGTDFHCIPEILEIYYDIIKGFTQPYETEHEQLLFKILLPLHK
PPSLTKYFHQLIKCIIAFLNQYPSFIEKYVKGLLRLWPKTSFTKVTLFLS
EIARILVIKNEQEVKKVMLTIFNHIAKCLCDESNKIAEHTLLLWKNNAVL
EVIHRNHALIMPIVYPHVLRVLIRHYMRKPMQTNASIALCTLLKMNNPML
RCLTTVCMSTDHRPMKHDAENSIPKASFLDH
BO21829.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:11:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32568-PC | 325 | CG32568-PC | 1..325 | 1..325 | 1706 | 100 | Plus |
CG32568-PB | 325 | CG32568-PB | 1..325 | 1..325 | 1706 | 100 | Plus |
wdb-PF | 524 | CG5643-PF | 149..437 | 31..320 | 488 | 34.8 | Plus |
wdb-PE | 524 | CG5643-PE | 149..437 | 31..320 | 488 | 34.8 | Plus |
wdb-PC | 524 | CG5643-PC | 149..437 | 31..320 | 488 | 34.8 | Plus |