Clone BO21829 Report

Search the DGRC for BO21829

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:218
Well:29
Vector:pDNR-Dual
Associated Gene/TranscriptCG32568-RB
Protein status:BO21829.pep: Imported from assembly
Sequenced Size:1009

Clone Sequence Records

BO21829.complete Sequence

1009 bp assembled on 2012-04-24

GenBank Submission: KX797094

> BO21829.complete
GAAGTTATCAGTCGACATGAATAACTCCAAACGCTCGCGACTCAGCGACA
AGGATGAAGGTCCGTGCAAAATTCGAAAAGCGACCAACCTGTCGGATAAG
AAGGCAATCGTAGATCTATTCTCTAGTTTCGTGAATACACATCATTTTCG
ACCCAACCCCGATGGTCAGAGGATTGATAAAATAATTGTAATAAAGTTAG
TGGAACGCTTAGAAACTACAGATGTAAATGATCGCAAATTTATGCAGAGT
ATATTGCGGCGCGTCTATTTAAAGTGCACCGACTTGCGTCTATTTATTCG
AAATCAGCTCAACGATGTATTCTTTCGATTGATTTTCGAAGGAACTGACT
TTCATTGCATCCCAGAAATTCTGGAAATTTACTATGATATAATCAAGGGA
TTTACTCAACCATATGAGACTGAACATGAGCAACTGCTCTTTAAGATCCT
TTTGCCTTTGCACAAGCCGCCATCGTTAACAAAGTATTTTCATCAGCTGA
TAAAATGCATTATTGCATTCCTTAACCAATATCCATCTTTCATTGAAAAA
TATGTCAAAGGTCTTCTACGGCTCTGGCCGAAGACGTCCTTTACTAAGGT
GACATTGTTTCTAAGCGAGATTGCCAGAATTTTGGTAATAAAAAATGAGC
AAGAGGTCAAGAAAGTCATGCTGACGATTTTTAATCATATTGCAAAATGT
CTGTGTGATGAAAGCAATAAGATAGCCGAGCACACTCTTCTTTTGTGGAA
AAACAATGCGGTTTTGGAGGTTATACATCGAAACCACGCGCTCATCATGC
CCATTGTATATCCACACGTATTACGCGTATTGATACGTCATTATATGAGA
AAACCAATGCAAACGAATGCCTCCATTGCTTTATGTACTTTACTAAAAAT
GAACAATCCGATGCTTAGATGCCTGACTACTGTATGCATGAGCACCGATC
ATAGACCGATGAAACACGACGCCGAGAATTCTATACCTAAGGCAAGCTTT
CTAGACCAT

BO21829.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:39:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG32568-RC 978 CG32568-PC 1..975 17..991 4875 100 Plus
CG32568-RB 978 CG32568-PB 1..975 17..991 4875 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:39:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG32568-RC 1818 CG32568-RC 99..1073 17..991 4875 100 Plus
CG32568-RB 1539 CG32568-RB 99..1073 17..991 4875 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:39:03
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16741524..16741857 388..721 1670 100 Plus
X 23542271 X 16741902..16742173 720..991 1360 100 Plus
X 23542271 X 16741237..16741429 195..387 965 100 Plus
X 23542271 X 16741004..16741183 17..196 900 100 Plus
Blast to na_te.dros performed on 2014-11-28 05:39:04 has no hits.

BO21829.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-10-06 12:06:43 Download gff for BO21829.complete
Subject Subject Range Query Range Percent Splice Strand
CG32568-RA 69..1034 17..993 98   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:01:34 Download gff for BO21829.complete
Subject Subject Range Query Range Percent Splice Strand
CG32568-RB 99..1073 17..993 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:49 Download gff for BO21829.complete
Subject Subject Range Query Range Percent Splice Strand
CG32568-RB 99..1073 17..993 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:15:35 Download gff for BO21829.complete
Subject Subject Range Query Range Percent Splice Strand
CG32568-RB 99..1073 17..993 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:15:35 Download gff for BO21829.complete
Subject Subject Range Query Range Percent Splice Strand
X 16741004..16741183 17..196 100 -> Plus
X 16741239..16741429 197..387 100 -> Plus
X 16741524..16741857 388..721 100 -> Plus
X 16741904..16742173 722..993 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:49 Download gff for BO21829.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 16635037..16635216 17..196 100 -> Plus
arm_X 16635272..16635462 197..387 100 -> Plus
arm_X 16635557..16635890 388..721 100 -> Plus
arm_X 16635937..16636206 722..993 99   Plus

BO21829.pep Sequence

Translation from 16 to 1009

> BO21829.pep
MNNSKRSRLSDKDEGPCKIRKATNLSDKKAIVDLFSSFVNTHHFRPNPDG
QRIDKIIVIKLVERLETTDVNDRKFMQSILRRVYLKCTDLRLFIRNQLND
VFFRLIFEGTDFHCIPEILEIYYDIIKGFTQPYETEHEQLLFKILLPLHK
PPSLTKYFHQLIKCIIAFLNQYPSFIEKYVKGLLRLWPKTSFTKVTLFLS
EIARILVIKNEQEVKKVMLTIFNHIAKCLCDESNKIAEHTLLLWKNNAVL
EVIHRNHALIMPIVYPHVLRVLIRHYMRKPMQTNASIALCTLLKMNNPML
RCLTTVCMSTDHRPMKHDAENSIPKASFLDH

BO21829.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:11:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG32568-PC 325 CG32568-PC 1..325 1..325 1706 100 Plus
CG32568-PB 325 CG32568-PB 1..325 1..325 1706 100 Plus
wdb-PF 524 CG5643-PF 149..437 31..320 488 34.8 Plus
wdb-PE 524 CG5643-PE 149..437 31..320 488 34.8 Plus
wdb-PC 524 CG5643-PC 149..437 31..320 488 34.8 Plus