BO21832.complete Sequence
1129 bp assembled on 2010-01-08
> BO21832.complete
GAAGTTATCAGTCGACATGTCCTTCGCGGCTATGGCGAATACCAACACAG
AAAAACTTTACATGCAACTAAGCGCATCGGAATTATCAGCAATTATTATG
AAAGATTCACCCAATTCCAACGACCGTGATGCGGGTTTTTGTTCCGCCAG
TTCGGAAAGCGAAGGCGGAGACGACTTGGTCGTCGAGCACGCGCGCAGTG
GCAGTCCCGACATCAGACCAAAAGGAACAGACTCGGCGGACTCCAAGCCA
ATAGCCCTTGTCCGCAACAAACGCAAGAGTTCGGAACCCTTCAAAGTCGT
AGGTTTGACGACTCCCAACTCTAAATCCATGCCTGGTCCTCCGTCCAGTG
CGAGTATGAATGCAACTGGTCCGCTAAAGAAACGCATACGATACACATCT
TCCGCCGATTCGGCAGTTGTCCTAACGCCACCAGCCATAGACTCTCCACC
GCCCAACAGTTGCATACCTTCCACGTTGCGCCTGCAGCATGAAATAATGC
CTAATCCGGCACATATATATGTTCGCCATCCGGGAGTTACGACTCTTCAC
AGATCGCTTGCTGCCCACCCAGAACAGCTGGAACCACTCGCATTAGTAAC
GACCAAAAAGCAATGTGTCGACCAAGCGGGGCCTAAAATAGAGGCCTTTT
CCGCATTGCTAATTGGAAAACAGCCATCCGCCAAAAAAACGTTGAAGGAA
AGGACGCAAAAAGAATCAACGTCATCTTCCTTTTTAGAAGCTAGTCTTAG
CGATGAGGATCTGAACAAGACGGGATTGGCACCAATTTCGCGACCTCATC
AACATCAACGCAATTACAAGAATATGACTAGGGAGCGCCGCATTGAGGCG
AACGCACGTGAACGGACCCGTGTACACACCATATCCGCCGCCTACGAAAC
GCTCCGCCAAGCTGTTCCAGCCTATGCCAGCACTCAAAAACTTTCCAAAC
TCTCCGTTCTTCGGGTAGCGTGTTCCTATATACTAACCTTAAGTAGAATG
GCTGGCGAGGATTACAGCGCCGATCAATCCGTACCGTCCATTGCCACGTG
CTTAGAAGCTGTAACATCAACCATCCAAACGGAGGGAAAAGTGAAACGAA
AGAAAGACGAGGCAAGCTTTCTAGACCAT
BO21832.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:28:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| net-RC | 1083 | CG11450-PC | 1..1080 | 32..1111 | 5400 | 100 | Plus |
| net-RB | 1083 | CG11450-PB | 1..1080 | 32..1111 | 5400 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:28:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| net-RC | 1662 | CG11450-RC | 281..1375 | 17..1111 | 5475 | 100 | Plus |
| net-RB | 2225 | CG11450-RB | 281..1375 | 17..1111 | 5475 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:28:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 83271..84279 | 1111..103 | 5045 | 100 | Minus |
| 2L | 23513712 | 2L | 87020..87107 | 104..17 | 440 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:28:04 has no hits.
BO21832.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-01-08 08:58:07 Download gff for
BO21832.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| net-RB | 276..1370 | 17..1113 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:20:06 Download gff for
BO21832.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| net-RB | 281..1375 | 17..1113 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:29:55 Download gff for
BO21832.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| net-RB | 281..1375 | 17..1113 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:29:55 Download gff for
BO21832.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 83269..84277 | 105..1113 | 99 | <- | Minus |
| 2L | 87020..87107 | 17..104 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:20:06 Download gff for
BO21832.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 83269..84277 | 105..1113 | 99 | <- | Minus |
| arm_2L | 87020..87107 | 17..104 | 100 | | Minus |
BO21832.pep Sequence
Translation from 16 to 1129
> BO21832.pep
MSFAAMANTNTEKLYMQLSASELSAIIMKDSPNSNDRDAGFCSASSESEG
GDDLVVEHARSGSPDIRPKGTDSADSKPIALVRNKRKSSEPFKVVGLTTP
NSKSMPGPPSSASMNATGPLKKRIRYTSSADSAVVLTPPAIDSPPPNSCI
PSTLRLQHEIMPNPAHIYVRHPGVTTLHRSLAAHPEQLEPLALVTTKKQC
VDQAGPKIEAFSALLIGKQPSAKKTLKERTQKESTSSSFLEASLSDEDLN
KTGLAPISRPHQHQRNYKNMTRERRIEANARERTRVHTISAAYETLRQAV
PAYASTQKLSKLSVLRVACSYILTLSRMAGEDYSADQSVPSIATCLEAVT
STIQTEGKVKRKKDEASFLDH
BO21832.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:39:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| net-PC | 360 | CG11450-PC | 1..360 | 6..365 | 1819 | 100 | Plus |
| net-PB | 360 | CG11450-PB | 1..360 | 6..365 | 1819 | 100 | Plus |
