BO21853.complete Sequence
1504 bp assembled on 2010-01-06
GenBank Submission: KX795182
> BO21853.complete
GAAGTTATCAGTCGACATGGCTGCACCAGCAGCCTGTACGCGTTTTTCGG
ACAATTACGACATCAAAGAAGAGTTGGGAAAAGGAGCATTCTCAATTGTG
AAAAGATGTGTCCAAAAGTCAACTGGCTTTGAATTTGCTGCAAAAATTAT
CAATACAAAAAAATTAACTGCCAGAGACTTTCAAAAACTGGAACGTGAAG
CAAGGATCTGCAGAAAGTTACACCATCCCAACATAGTGCGGCTACATGAC
AGTATACAGGAGGAGAACTATCACTACCTTGTTTTTGACCTTGTAACCGG
TGGTGAACTTTTTGAAGATATCGTTGCACGCGAATTTTATTCAGAAGCTG
ATGCATCACATTGTATTCAACAAATATTGGAATCGGTCAATCACTGCCAC
CAAAATGGTGTGGTGCACCGAGATCTGAAACCAGAGAATTTACTATTAGC
TAGTAAGGCTAAGGGTGCAGCAGTGAAACTCGCTGACTTTGGTCTAGCCA
TTGAAGTTCAAGGCGATCATCAGGCTTGGTTTGGATTTGCCGGCACACCA
GGATATCTGTCTCCTGAGGTATTGAAAAAGGAGCCCTATGGGAAATCGGT
AGACATATGGGCATGTGGAGTTATTCTTTACATACTTCTTGTCGGTTATC
CACCCTTTTGGGATGAAGATCAGCACCGACTGTACTCGCAGATAAAAGCG
GGAGCTTATGATTATCCGTCTCCAGAATGGGATACGGTTACTCCAGAAGC
TAAAAATCTTATTAATCAAATGCTAACCGTTAATCCAAATAAACGAATAA
CTGCAGCTGAGGCTTTAAAACATCCGTGGATTTGTCAACGCGAACGTGTG
GCTTCCGTTGTGCATCGCCAAGAAACCGTAGACTGTCTCAAGAAATTTAA
TGCGCGGCGCAAGCTAAAGGGAGCCATACTTACGACAATGTTGGCGACCA
GAAATTTTTCGAGCAGAAGTATGATAACTAAAAAAGGTGAAGGATCACAG
GTCAAAGAATCAACCGATTCATCTAGCACTACTCTTGAAGACGATGACAT
AAAAGCAGCTAGACGACAAGAAATAATAAAGATAACTGAGCAGTTGATTG
AAGCAATTAACAGTGGCGACTTTGATGGATACACCAAAATATGTGATCCG
CATCTAACTGCCTTTGAGCCGGAAGCACTGGGTAACCTTGTAGAAGGAAT
TGATTTTCATAAATTTTATTTTGAAAATGTTCTTGGTAAAAACTGCAAAG
CTATAAACACAACCATTTTAAATCCTCATGTGCACTTACTTGGTGAAGAA
GCCGCTTGCATTGCCTATGTGAGACTTACGCAGTACATTGATAAGCAAGG
ACATGCACATACCCATCAGTCCGAGGAGACGCGAGTCTGGCACAAACGCG
ATAACAAATGGCAGAATGTTCATTTTCATCGAAGTGCATCTGCCAAAATA
AGCGGAGCAACTACATTCGATTTTATACCCCAAAAAGCAAGCTTTCTAGA
CCAT
BO21853.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:20:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CaMKII-RH | 1473 | CG18069-PH | 1..1470 | 17..1486 | 7350 | 100 | Plus |
CaMKII-RC | 1473 | CG18069-PC | 1..1470 | 17..1486 | 7350 | 100 | Plus |
CaMKII-RA | 1473 | CG18069-PA | 1..1470 | 17..1486 | 7350 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:20:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CaMKII-RH | 2371 | CG18069-RH | 776..2245 | 17..1486 | 7350 | 100 | Plus |
CaMKII-RC | 3759 | CG18069-RC | 297..1766 | 17..1486 | 7350 | 100 | Plus |
CaMKII-RA | 3589 | CG18069-RA | 127..1596 | 17..1486 | 7350 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:20:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
4 | 1348131 | 4 | 1047822..1048148 | 618..292 | 1635 | 100 | Minus |
4 | 1348131 | 4 | 1037281..1037422 | 1486..1345 | 710 | 100 | Minus |
4 | 1348131 | 4 | 1047263..1047390 | 963..836 | 640 | 100 | Minus |
4 | 1348131 | 4 | 1047453..1047575 | 835..713 | 615 | 100 | Minus |
4 | 1348131 | 4 | 1037471..1037591 | 1349..1229 | 590 | 99.2 | Minus |
4 | 1348131 | 4 | 1047635..1047730 | 712..617 | 480 | 100 | Minus |
4 | 1348131 | 4 | 1037646..1037740 | 1229..1135 | 475 | 100 | Minus |
4 | 1348131 | 4 | 1050298..1050392 | 176..82 | 475 | 100 | Minus |
4 | 1348131 | 4 | 1045156..1045248 | 1055..963 | 465 | 100 | Minus |
4 | 1348131 | 4 | 1038359..1038441 | 1134..1052 | 415 | 100 | Minus |
4 | 1348131 | 4 | 1050455..1050519 | 81..17 | 325 | 100 | Minus |
4 | 1348131 | 4 | 1049187..1049248 | 236..175 | 310 | 100 | Minus |
4 | 1348131 | 4 | 1048504..1048560 | 291..235 | 285 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:20:31 has no hits.
BO21853.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-01-06 09:26:16 Download gff for
BO21853.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CaMKII-RE | 297..1338 | 17..1058 | 99 | -> | Plus |
CaMKII-RE | 1396..1818 | 1059..1481 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:16:59 Download gff for
BO21853.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CaMKII-RA | 127..1591 | 17..1481 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:27:09 Download gff for
BO21853.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CaMKII-RA | 127..1591 | 17..1481 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:27:09 Download gff for
BO21853.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
4 | 1047264..1047390 | 836..962 | 100 | <- | Minus |
4 | 1047453..1047575 | 713..835 | 100 | <- | Minus |
4 | 1047635..1047729 | 618..712 | 100 | <- | Minus |
4 | 1037286..1037422 | 1345..1481 | 100 | <- | Minus |
4 | 1037476..1037590 | 1230..1344 | 100 | <- | Minus |
4 | 1037646..1037740 | 1135..1229 | 100 | <- | Minus |
4 | 1038359..1038437 | 1056..1134 | 100 | <- | Minus |
4 | 1045156..1045248 | 963..1055 | 100 | <- | Minus |
4 | 1047823..1048148 | 292..617 | 100 | <- | Minus |
4 | 1048504..1048558 | 237..291 | 100 | <- | Minus |
4 | 1049187..1049246 | 177..236 | 100 | <- | Minus |
4 | 1050298..1050392 | 82..176 | 100 | <- | Minus |
4 | 1050455..1050519 | 17..81 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:16:59 Download gff for
BO21853.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_4 | 1057912..1058048 | 1345..1481 | 100 | <- | Minus |
arm_4 | 1058102..1058216 | 1230..1344 | 100 | <- | Minus |
arm_4 | 1058272..1058366 | 1135..1229 | 100 | <- | Minus |
arm_4 | 1058985..1059063 | 1056..1134 | 100 | <- | Minus |
arm_4 | 1065782..1065874 | 963..1055 | 100 | <- | Minus |
arm_4 | 1067890..1068016 | 836..962 | 100 | <- | Minus |
arm_4 | 1068079..1068201 | 713..835 | 100 | <- | Minus |
arm_4 | 1068261..1068355 | 618..712 | 100 | <- | Minus |
arm_4 | 1068449..1068774 | 292..617 | 100 | <- | Minus |
arm_4 | 1069130..1069184 | 237..291 | 100 | <- | Minus |
arm_4 | 1069813..1069872 | 177..236 | 100 | <- | Minus |
arm_4 | 1070924..1071018 | 82..176 | 100 | <- | Minus |
arm_4 | 1071081..1071145 | 17..81 | 100 | | Minus |
BO21853.pep Sequence
Translation from 16 to 1504
> BO21853.pep
MAAPAACTRFSDNYDIKEELGKGAFSIVKRCVQKSTGFEFAAKIINTKKL
TARDFQKLEREARICRKLHHPNIVRLHDSIQEENYHYLVFDLVTGGELFE
DIVAREFYSEADASHCIQQILESVNHCHQNGVVHRDLKPENLLLASKAKG
AAVKLADFGLAIEVQGDHQAWFGFAGTPGYLSPEVLKKEPYGKSVDIWAC
GVILYILLVGYPPFWDEDQHRLYSQIKAGAYDYPSPEWDTVTPEAKNLIN
QMLTVNPNKRITAAEALKHPWICQRERVASVVHRQETVDCLKKFNARRKL
KGAILTTMLATRNFSSRSMITKKGEGSQVKESTDSSSTTLEDDDIKAARR
QEIIKITEQLIEAINSGDFDGYTKICDPHLTAFEPEALGNLVEGIDFHKF
YFENVLGKNCKAINTTILNPHVHLLGEEAACIAYVRLTQYIDKQGHAHTH
QSEETRVWHKRDNKWQNVHFHRSASAKISGATTFDFIPQKASFLDH
BO21853.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:03:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CaMKII-PH | 490 | CG18069-PH | 1..490 | 1..490 | 2593 | 100 | Plus |
CaMKII-PC | 490 | CG18069-PC | 1..490 | 1..490 | 2593 | 100 | Plus |
CaMKII-PA | 490 | CG18069-PA | 1..490 | 1..490 | 2593 | 100 | Plus |
CaMKII-PB | 509 | CG18069-PB | 1..509 | 1..490 | 2563 | 96.3 | Plus |
CaMKII-PE | 509 | CG18069-PE | 1..509 | 1..490 | 2563 | 96.3 | Plus |