Clone BO21854 Report

Search the DGRC for BO21854

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:218
Well:54
Vector:pDNR-Dual
Associated Gene/TranscriptCG10384-RC
Protein status:BO21854.pep: Imported from assembly
Sequenced Size:1510

Clone Sequence Records

BO21854.complete Sequence

1510 bp assembled on 2012-04-24

GenBank Submission: KX796981

> BO21854.complete
GAAGTTATCAGTCGACATGGAAACTAAAGCTGGCTTAAGTGCTCTGGAGG
AAAGGTCCCTGAAAGGTTCAGAGAAACTTAAAATGCTGGACATCACTCGC
GACAAGCCGGTGAAGGTGGCCGTCAAAGTGGCCGTTCCTGTGCGGGATCA
CCCAAAGTTCAATTTCGTGGGCAAGCTGCTCGGACCCAAGGGCAACTCGA
TGAAGCGCCTGCAGGAGGACACCATGTGCAAGATGGCCGTTCTGGGACGC
GGATCGATGCGAGACCGGCGGAAGGAGGAGGAGCTGCGGGGCAGTGGCGA
CAGTCGCTACGCCCATCTCTTCGAGGACCTGCACGTCGAGATCTCGACCT
TCGCCGCTCCGGCGGAGGCCCATGCTCGGATAGCCTACGCTCTGGCGGAA
GTGCGCCGCTTTCTGGTTCCGGACTACCACGATGACATCCGCCAGGAGCA
AATGTGGGAAATGCAGGCGCTGACGTCCACGCCCGCACTGGGTGCCCACT
CGCTGGAGGATTCGCATAGCCCTACCATCAACAGCAGTAGCCAGGTGGGC
GGCACCACCAACTCCTCCTCCAACGGGGCCAGTGGGCGTGGCCTGGGCGG
CGGACTAGCCGACATGGACACGTCCAACGATGACAAATCGGACGACGCCA
GCGGCATGGAGTGCCTGTCGGCAGTCGACAAGCTTGACTGCTCGTCCAGC
TGCGCCAGTCTGGGCATCAGTGGCATCACCACCATCAGCACCACCAGCCC
CGAGCATCCGCATCCGCACCAGCACCACCAGCAGCACCAACAGCACCAAC
AGCACCACGCCCACCTGCACCCAGCACACGCCCATGGAAACCAGCAGCAG
CAGCAGCAGGTCCAGCACCACCACAGCCACCAGGCGCACTTCCACCAGCT
CCTGCAGCAGGCTCACGGTGGAGCCAGTGCCGCAGCGGCTGCCTGCGGGG
AGCATCTCTCTGGACAGACGACTCCGGCGACGGCGGCGGCATTGCACACC
ACAGCCATGGCAGTGGCACTCCAGCATCAGCTCACAGCCGCAGGAATCGG
AGGACTCCTGAAGCCGGCCACCGGAGTGGGGGCCACCATGGCCGGGCTGC
CCACCACCCAGGCGGGAGCCGCCGCCCTTCAGTTGCCCGGCGATGGGGAG
TCATCTGGATCGACGCTCACGCTGCTGGAGCCACCGGGCACCGCACTCCT
GCATCCCGCTCTGCGCAACGTCAAGACCATCAACATAGGTGGCGGCCTGG
GAAGGAAGCGTCCCCTGCTGGGTGTTCCCCGCTCCGGAATGAACCCCACA
AAGCGCACGGTGATGAGCCTGCTGGCCAGGGCCAAGAACTCGCAGGCGCT
GCACTCGGTCCGCCAACCGATGGTGACGGCCACCAGTTTCGCTGAACCCT
TGCAGATGCTGGCCTCGCCGTTCATCATTCCGCACCGGGCGGTGGACCAG
CCGATCCTGGCGCTGTCGAAGGAGAGCCTCGCGCAGGGCGTCGCAAGCTT
TCTAGACCAT

BO21854.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:41:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG10384-RE 1479 CG10384-PE 1..1476 17..1492 7365 99.9 Plus
CG10384-RD 1479 CG10384-PD 1..1476 17..1492 7365 99.9 Plus
qkr58E-1-RD 1140 CG3613-PD 371..506 150..285 245 78.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:41:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG10384-RE 3849 CG10384-RE 753..2228 17..1492 7365 99.9 Plus
CG10384-RD 2509 CG10384-RD 753..2228 17..1492 7365 99.9 Plus
qkr58E-1-RD 1902 CG3613-RD 494..629 150..285 245 78.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:41:37
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22469585..22470156 421..992 2860 100 Plus
2R 25286936 2R 22466682..22466948 156..422 1335 100 Plus
2R 25286936 2R 22470627..22470878 989..1240 1245 99.6 Plus
2R 25286936 2R 22471026..22471184 1237..1395 795 100 Plus
2R 25286936 2R 22471278..22471374 1396..1492 485 100 Plus
2R 25286936 2R 22466475..22466563 69..157 445 100 Plus
2R 25286936 2R 22460092..22460146 17..71 260 98.2 Plus
2R 25286936 2R 22414825..22414960 285..150 245 78.7 Minus
2R 25286936 2R 17471170..17471264 156..250 190 80 Plus
Blast to na_te.dros performed on 2014-11-28 07:41:39 has no hits.

BO21854.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-10-06 12:07:18 Download gff for BO21854.complete
Subject Subject Range Query Range Percent Splice Strand
CG10384-RA 5..90 69..154 100 == Plus
CG10384-RA 91..1410 173..1494 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:01:43 Download gff for BO21854.complete
Subject Subject Range Query Range Percent Splice Strand
CG10384-RC 1..1410 83..1494 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:06 Download gff for BO21854.complete
Subject Subject Range Query Range Percent Splice Strand
CG10384-RD 753..2228 17..1494 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:01:54 Download gff for BO21854.complete
Subject Subject Range Query Range Percent Splice Strand
CG10384-RD 753..2228 17..1494 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:01:54 Download gff for BO21854.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22466478..22466563 72..157 100 -> Plus
2R 22460092..22460146 17..71 98 -> Plus
2R 22466684..22466947 158..421 100 -> Plus
2R 22469586..22470156 422..992 100 -> Plus
2R 22470631..22470876 993..1238 100 -> Plus
2R 22471028..22471184 1239..1395 100 -> Plus
2R 22471278..22471374 1396..1494 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:06 Download gff for BO21854.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18347597..18347651 17..71 98 -> Plus
arm_2R 18353983..18354068 72..157 100 -> Plus
arm_2R 18354189..18354452 158..421 100 -> Plus
arm_2R 18357091..18357661 422..992 100 -> Plus
arm_2R 18358136..18358381 993..1238 100 -> Plus
arm_2R 18358533..18358689 1239..1395 100 -> Plus
arm_2R 18358783..18358879 1396..1494 97   Plus

BO21854.pep Sequence

Translation from 16 to 1510

> BO21854.pep
METKAGLSALEERSLKGSEKLKMLDITRDKPVKVAVKVAVPVRDHPKFNF
VGKLLGPKGNSMKRLQEDTMCKMAVLGRGSMRDRRKEEELRGSGDSRYAH
LFEDLHVEISTFAAPAEAHARIAYALAEVRRFLVPDYHDDIRQEQMWEMQ
ALTSTPALGAHSLEDSHSPTINSSSQVGGTTNSSSNGASGRGLGGGLADM
DTSNDDKSDDASGMECLSAVDKLDCSSSCASLGISGITTISTTSPEHPHP
HQHHQQHQQHQQHHAHLHPAHAHGNQQQQQQVQHHHSHQAHFHQLLQQAH
GGASAAAAACGEHLSGQTTPATAAALHTTAMAVALQHQLTAAGIGGLLKP
ATGVGATMAGLPTTQAGAAALQLPGDGESSGSTLTLLEPPGTALLHPALR
NVKTINIGGGLGRKRPLLGVPRSGMNPTKRTVMSLLARAKNSQALHSVRQ
PMVTATSFAEPLQMLASPFIIPHRAVDQPILALSKESLAQGVASFLDH

BO21854.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:08:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG10384-PE 492 CG10384-PE 1..492 1..492 2537 100 Plus
CG10384-PD 492 CG10384-PD 1..492 1..492 2537 100 Plus
qkr54B-PD 428 CG4816-PD 105..275 18..195 484 56.2 Plus
qkr54B-PB 428 CG4816-PB 105..275 18..195 484 56.2 Plus
qkr54B-PA 428 CG4816-PA 105..275 18..195 484 56.2 Plus