BO21903.complete Sequence
601 bp assembled on 2009-12-08
GenBank Submission: KX796906
> BO21903.complete
GAAGTTATCAGTCGACATGGGCAATAAGTCGTCGCTTTTCCTGCGGAACG
AGGAGATCGCGCAAATCCAGGAGGAGACTGGCTTCACCCCCAACCAAATC
GAGCGACTTTACTCGCGCTTCACCTCCTTGGATCGCAATGATTGCGGAAC
CTTGTCCCGGGAGGATCTGATGCGTATCCCGGAACTGGCCATTAATCCGC
TGTGCGAGCGGATAGTTCATTCCTTTTTCGCTGAGAGCAACGACGATCGG
GTGAACTTCCGGCAGTTCATGAACGTCCTGGCCCACTTCCGGCCGCTGAG
GGATAACAAGCAAAGTAAGCTCAACAGCCGGGAGGAGAAGCTGAAGTTCG
CCTTCAAGATGTACGATCTGGATGACGATGGTGTGATCAGCAGAGACGAG
CTGCTCTCCATCCTGCACATGATGGTCGGGGCGAACATTAGCCAGGACCA
GTTGGTCAGCATTGCGGAGAGGACGATCCTGGAGGCGGACCTGTGCTGCC
AGGGCAAGATCTCGTTCGAGGACTTCTGCAAAGCTCTGGACCGCACCGAC
GTGGATCAGAAGATGTCCATACGGTTTCTCAACGCAAGCTTTCTAGACCA
T
BO21903.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:17:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| elm-RB | 570 | CG2185-PB | 1..567 | 17..583 | 2835 | 100 | Plus |
| elm-RA | 570 | CG2185-PA | 1..567 | 17..583 | 2835 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:17:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| elm-RB | 1321 | CG2185-RB | 139..706 | 16..583 | 2840 | 100 | Plus |
| elm-RA | 1128 | CG2185-RA | 139..706 | 16..583 | 2840 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:16:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5653255..5653754 | 583..84 | 2500 | 100 | Minus |
| 3R | 32079331 | 3R | 5654656..5654723 | 83..16 | 340 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:17:00 has no hits.
BO21903.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 15:05:58 Download gff for
BO21903.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2185-RA | 170..736 | 17..585 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:15:30 Download gff for
BO21903.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| elm-RA | 140..706 | 17..585 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:25:48 Download gff for
BO21903.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| elm-RA | 140..706 | 17..585 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:25:48 Download gff for
BO21903.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5653253..5653754 | 84..585 | 99 | <- | Minus |
| 3R | 5654656..5654722 | 17..83 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:15:30 Download gff for
BO21903.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1478975..1479476 | 84..585 | 99 | <- | Minus |
| arm_3R | 1480378..1480444 | 17..83 | 100 | | Minus |
BO21903.pep Sequence
Translation from 16 to 601
> BO21903.pep
MGNKSSLFLRNEEIAQIQEETGFTPNQIERLYSRFTSLDRNDCGTLSRED
LMRIPELAINPLCERIVHSFFAESNDDRVNFRQFMNVLAHFRPLRDNKQS
KLNSREEKLKFAFKMYDLDDDGVISRDELLSILHMMVGANISQDQLVSIA
ERTILEADLCCQGKISFEDFCKALDRTDVDQKMSIRFLNASFLDH
BO21903.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:13:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| elm-PB | 189 | CG2185-PB | 1..189 | 1..189 | 969 | 100 | Plus |
| elm-PA | 189 | CG2185-PA | 1..189 | 1..189 | 969 | 100 | Plus |
| CanB-PB | 170 | CG4209-PB | 1..168 | 1..185 | 311 | 38.9 | Plus |
| CanB-PA | 170 | CG4209-PA | 1..168 | 1..185 | 311 | 38.9 | Plus |
| CanB2-PB | 170 | CG11217-PB | 1..168 | 1..185 | 308 | 38.9 | Plus |
